Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
Ctr9Q62018 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ctr9Q62018 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ctr9Q62018 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ctr9Q62018 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
Ctr9Q62018 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ctr9Q62018 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ctr9Q62018 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
Ctr9Q62018 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ctr9Q62018 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC17.66■□□□□ 0.42
Ctr9Q62018 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Ctr9Q62018 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ctr9Q62018 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Ctr9Q62018 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC17.66■□□□□ 0.42
Ctr9Q62018 CT030684.1-201ENSMUST00000227292 914 ntBASIC17.66■□□□□ 0.42
Ctr9Q62018 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ctr9Q62018 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC17.66■□□□□ 0.42
Ctr9Q62018 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ctr9Q62018 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ctr9Q62018 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ctr9Q62018 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC17.66■□□□□ 0.42
Ctr9Q62018 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Ctr9Q62018 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ctr9Q62018 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Ctr9Q62018 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ctr9Q62018 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Ctr9Q62018 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ctr9Q62018 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ctr9Q62018 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ctr9Q62018 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ctr9Q62018 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ctr9Q62018 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ctr9Q62018 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ctr9Q62018 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ctr9Q62018 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Ctr9Q62018 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ctr9Q62018 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ctr9Q62018 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ctr9Q62018 Gm43767-201ENSMUST00000198933 381 ntBASIC17.65■□□□□ 0.42
Ctr9Q62018 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC17.65■□□□□ 0.42
Ctr9Q62018 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC17.65■□□□□ 0.42
Ctr9Q62018 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC17.65■□□□□ 0.42
Ctr9Q62018 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC17.65■□□□□ 0.42
Ctr9Q62018 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ctr9Q62018 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC17.65■□□□□ 0.42
Ctr9Q62018 Gm11839-201ENSMUST00000120647 1953 ntBASIC17.65■□□□□ 0.42
Ctr9Q62018 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ctr9Q62018 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ctr9Q62018 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ctr9Q62018 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC17.65■□□□□ 0.42
Ctr9Q62018 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ctr9Q62018 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ctr9Q62018 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC17.65■□□□□ 0.42
Ctr9Q62018 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC17.65■□□□□ 0.42
Ctr9Q62018 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ctr9Q62018 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ctr9Q62018 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Ctr9Q62018 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ctr9Q62018 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ctr9Q62018 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.42
Ctr9Q62018 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC17.64■□□□□ 0.42
Ctr9Q62018 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ctr9Q62018 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC17.64■□□□□ 0.41
Ctr9Q62018 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ctr9Q62018 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ctr9Q62018 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Ctr9Q62018 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC17.64■□□□□ 0.41
Ctr9Q62018 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ctr9Q62018 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC17.64■□□□□ 0.41
Ctr9Q62018 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Ctr9Q62018 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC17.64■□□□□ 0.41
Ctr9Q62018 Gm44335-201ENSMUST00000196879 141 ntBASIC17.64■□□□□ 0.41
Ctr9Q62018 Gm44297-201ENSMUST00000198304 141 ntBASIC17.64■□□□□ 0.41
Ctr9Q62018 Gm44346-201ENSMUST00000198851 141 ntBASIC17.64■□□□□ 0.41
Ctr9Q62018 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC17.64■□□□□ 0.41
Ctr9Q62018 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC17.64■□□□□ 0.41
Ctr9Q62018 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ctr9Q62018 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ctr9Q62018 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ctr9Q62018 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ctr9Q62018 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ctr9Q62018 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC17.64■□□□□ 0.41
Ctr9Q62018 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
Ctr9Q62018 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ctr9Q62018 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ctr9Q62018 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Ctr9Q62018 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ctr9Q62018 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ctr9Q62018 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ctr9Q62018 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ctr9Q62018 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ctr9Q62018 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ctr9Q62018 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ctr9Q62018 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ctr9Q62018 AC126250.1-201ENSMUST00000228343 1768 ntBASIC17.63■□□□□ 0.41
Ctr9Q62018 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ctr9Q62018 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ctr9Q62018 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ctr9Q62018 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ctr9Q62018 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms