Protein–RNA interactions for Protein: Q61457

Ccne1, G1/S-specific cyclin-E1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccne1Q61457 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccne1Q61457 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccne1Q61457 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccne1Q61457 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccne1Q61457 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccne1Q61457 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccne1Q61457 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccne1Q61457 Gm5049-201ENSMUST00000195878 1590 ntBASIC19.44■□□□□ 0.7
Ccne1Q61457 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ccne1Q61457 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Ccne1Q61457 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC19.44■□□□□ 0.7
Ccne1Q61457 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
Ccne1Q61457 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccne1Q61457 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Ccne1Q61457 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC19.43■□□□□ 0.7
Ccne1Q61457 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccne1Q61457 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
Ccne1Q61457 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccne1Q61457 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ccne1Q61457 Gm11424-201ENSMUST00000121929 829 ntBASIC19.43■□□□□ 0.7
Ccne1Q61457 Gm9719-201ENSMUST00000162765 543 ntBASIC19.43■□□□□ 0.7
Ccne1Q61457 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC19.43■□□□□ 0.7
Ccne1Q61457 AC132863.2-201ENSMUST00000226643 799 ntBASIC19.43■□□□□ 0.7
Ccne1Q61457 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccne1Q61457 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccne1Q61457 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccne1Q61457 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccne1Q61457 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccne1Q61457 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccne1Q61457 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC19.43■□□□□ 0.7
Ccne1Q61457 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccne1Q61457 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccne1Q61457 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccne1Q61457 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccne1Q61457 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccne1Q61457 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccne1Q61457 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccne1Q61457 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccne1Q61457 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccne1Q61457 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccne1Q61457 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Ccne1Q61457 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC19.42■□□□□ 0.7
Ccne1Q61457 Gm24543-201ENSMUST00000103867 82 ntBASIC19.42■□□□□ 0.7
Ccne1Q61457 Gm5566-201ENSMUST00000116118 459 ntBASIC19.42■□□□□ 0.7
Ccne1Q61457 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ccne1Q61457 Gm16215-201ENSMUST00000161990 637 ntBASIC19.42■□□□□ 0.7
Ccne1Q61457 Gtpbp10-211ENSMUST00000198799 648 ntBASIC19.42■□□□□ 0.7
Ccne1Q61457 Shd-206ENSMUST00000225145 998 ntBASIC19.42■□□□□ 0.7
Ccne1Q61457 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Ccne1Q61457 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccne1Q61457 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccne1Q61457 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccne1Q61457 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Ccne1Q61457 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccne1Q61457 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC19.42■□□□□ 0.7
Ccne1Q61457 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccne1Q61457 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
Ccne1Q61457 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ccne1Q61457 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ccne1Q61457 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccne1Q61457 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Ccne1Q61457 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Ccne1Q61457 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccne1Q61457 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ccne1Q61457 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC19.41■□□□□ 0.7
Ccne1Q61457 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ccne1Q61457 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC19.41■□□□□ 0.7
Ccne1Q61457 Gm44855-201ENSMUST00000205725 362 ntBASIC19.41■□□□□ 0.7
Ccne1Q61457 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC19.41■□□□□ 0.7
Ccne1Q61457 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccne1Q61457 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ccne1Q61457 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccne1Q61457 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC19.41■□□□□ 0.7
Ccne1Q61457 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccne1Q61457 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccne1Q61457 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccne1Q61457 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ccne1Q61457 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccne1Q61457 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccne1Q61457 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccne1Q61457 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC19.4■□□□□ 0.7
Ccne1Q61457 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ccne1Q61457 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccne1Q61457 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccne1Q61457 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccne1Q61457 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC19.4■□□□□ 0.7
Ccne1Q61457 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccne1Q61457 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccne1Q61457 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC19.4■□□□□ 0.7
Ccne1Q61457 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
Ccne1Q61457 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC19.4■□□□□ 0.7
Ccne1Q61457 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccne1Q61457 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccne1Q61457 Syt7-204ENSMUST00000223586 1344 ntBASIC19.4■□□□□ 0.7
Ccne1Q61457 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccne1Q61457 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccne1Q61457 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccne1Q61457 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC19.4■□□□□ 0.7
Ccne1Q61457 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ccne1Q61457 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms