Protein–RNA interactions for Protein: Q61345

Foxd1, Forkhead box protein D1, mousemouse

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd1Q61345 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Foxd1Q61345 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Foxd1Q61345 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Foxd1Q61345 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC17.3■□□□□ 0.36
Foxd1Q61345 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC17.3■□□□□ 0.36
Foxd1Q61345 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Foxd1Q61345 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Foxd1Q61345 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Foxd1Q61345 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Foxd1Q61345 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Foxd1Q61345 Gm11918-201ENSMUST00000121660 179 ntBASIC17.3■□□□□ 0.36
Foxd1Q61345 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC17.3■□□□□ 0.36
Foxd1Q61345 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC17.3■□□□□ 0.36
Foxd1Q61345 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Foxd1Q61345 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC17.3■□□□□ 0.36
Foxd1Q61345 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Foxd1Q61345 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Foxd1Q61345 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Foxd1Q61345 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Foxd1Q61345 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Foxd1Q61345 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Foxd1Q61345 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Foxd1Q61345 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Foxd1Q61345 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Foxd1Q61345 Prob1-201ENSMUST00000097619 3021 ntBASIC17.3■□□□□ 0.36
Foxd1Q61345 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Foxd1Q61345 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Foxd1Q61345 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC17.3■□□□□ 0.36
Foxd1Q61345 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Foxd1Q61345 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Foxd1Q61345 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC17.29■□□□□ 0.36
Foxd1Q61345 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Foxd1Q61345 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Foxd1Q61345 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Foxd1Q61345 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Foxd1Q61345 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Foxd1Q61345 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Foxd1Q61345 Gm13337-201ENSMUST00000119183 1594 ntBASIC17.29■□□□□ 0.36
Foxd1Q61345 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Foxd1Q61345 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Foxd1Q61345 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC17.29■□□□□ 0.36
Foxd1Q61345 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Foxd1Q61345 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Foxd1Q61345 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC17.29■□□□□ 0.36
Foxd1Q61345 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Foxd1Q61345 Gm19164-201ENSMUST00000210667 640 ntBASIC17.29■□□□□ 0.36
Foxd1Q61345 CT485787.1-201ENSMUST00000225617 968 ntBASIC17.29■□□□□ 0.36
Foxd1Q61345 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Foxd1Q61345 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Foxd1Q61345 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Foxd1Q61345 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Foxd1Q61345 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Foxd1Q61345 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Foxd1Q61345 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Foxd1Q61345 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Foxd1Q61345 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
Foxd1Q61345 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Foxd1Q61345 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Foxd1Q61345 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Foxd1Q61345 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Foxd1Q61345 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Foxd1Q61345 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Foxd1Q61345 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Foxd1Q61345 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Foxd1Q61345 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Foxd1Q61345 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC17.28■□□□□ 0.36
Foxd1Q61345 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Foxd1Q61345 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Foxd1Q61345 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Foxd1Q61345 Gm15782-201ENSMUST00000121073 445 ntBASIC17.28■□□□□ 0.36
Foxd1Q61345 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Foxd1Q61345 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Foxd1Q61345 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Foxd1Q61345 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC17.28■□□□□ 0.36
Foxd1Q61345 AC122024.2-201ENSMUST00000220086 871 ntBASIC17.28■□□□□ 0.36
Foxd1Q61345 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Foxd1Q61345 Gm9063-201ENSMUST00000223299 582 ntBASIC17.28■□□□□ 0.36
Foxd1Q61345 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Foxd1Q61345 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Foxd1Q61345 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Foxd1Q61345 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Foxd1Q61345 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Foxd1Q61345 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Foxd1Q61345 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Foxd1Q61345 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Foxd1Q61345 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC17.28■□□□□ 0.36
Foxd1Q61345 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC17.28■□□□□ 0.36
Foxd1Q61345 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Foxd1Q61345 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC17.27■□□□□ 0.36
Foxd1Q61345 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Foxd1Q61345 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC17.27■□□□□ 0.36
Foxd1Q61345 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Foxd1Q61345 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC17.27■□□□□ 0.36
Foxd1Q61345 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Foxd1Q61345 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Foxd1Q61345 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
Foxd1Q61345 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Foxd1Q61345 Gm6539-201ENSMUST00000119157 1064 ntBASIC17.27■□□□□ 0.36
Foxd1Q61345 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Foxd1Q61345 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms