Protein–RNA interactions for Protein: Q61179

Irf9, Interferon regulatory factor 9, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf9Q61179 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Irf9Q61179 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Irf9Q61179 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC18.64■□□□□ 0.57
Irf9Q61179 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC18.64■□□□□ 0.57
Irf9Q61179 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Irf9Q61179 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Irf9Q61179 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Irf9Q61179 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC18.64■□□□□ 0.57
Irf9Q61179 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Irf9Q61179 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Irf9Q61179 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Irf9Q61179 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC18.64■□□□□ 0.57
Irf9Q61179 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Irf9Q61179 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
Irf9Q61179 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Irf9Q61179 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Irf9Q61179 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Irf9Q61179 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Irf9Q61179 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Irf9Q61179 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Irf9Q61179 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Irf9Q61179 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Irf9Q61179 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Irf9Q61179 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Irf9Q61179 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Irf9Q61179 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Irf9Q61179 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Irf9Q61179 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Irf9Q61179 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC18.63■□□□□ 0.57
Irf9Q61179 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Irf9Q61179 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC18.63■□□□□ 0.57
Irf9Q61179 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Irf9Q61179 Gm30437-201ENSMUST00000206086 1201 ntBASIC18.63■□□□□ 0.57
Irf9Q61179 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Irf9Q61179 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Irf9Q61179 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Irf9Q61179 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Irf9Q61179 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Irf9Q61179 Gm43352-201ENSMUST00000196419 3065 ntBASIC18.63■□□□□ 0.57
Irf9Q61179 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Irf9Q61179 AC154767.3-201ENSMUST00000225150 1342 ntBASIC18.63■□□□□ 0.57
Irf9Q61179 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Irf9Q61179 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Irf9Q61179 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Irf9Q61179 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Irf9Q61179 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Irf9Q61179 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Irf9Q61179 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Irf9Q61179 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Irf9Q61179 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Irf9Q61179 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Irf9Q61179 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Irf9Q61179 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Irf9Q61179 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Irf9Q61179 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC18.62■□□□□ 0.57
Irf9Q61179 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Irf9Q61179 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Irf9Q61179 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Irf9Q61179 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Irf9Q61179 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Irf9Q61179 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Irf9Q61179 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC18.62■□□□□ 0.57
Irf9Q61179 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Irf9Q61179 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Irf9Q61179 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Irf9Q61179 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Irf9Q61179 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Irf9Q61179 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Irf9Q61179 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Irf9Q61179 Zkscan3-208ENSMUST00000224820 5398 ntBASIC18.61■□□□□ 0.57
Irf9Q61179 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Irf9Q61179 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Irf9Q61179 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Irf9Q61179 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Irf9Q61179 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Irf9Q61179 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Irf9Q61179 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Irf9Q61179 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC18.61■□□□□ 0.57
Irf9Q61179 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC18.61■□□□□ 0.57
Irf9Q61179 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Irf9Q61179 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Irf9Q61179 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Irf9Q61179 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Irf9Q61179 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Irf9Q61179 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC18.61■□□□□ 0.57
Irf9Q61179 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Irf9Q61179 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Irf9Q61179 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Irf9Q61179 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Irf9Q61179 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
Irf9Q61179 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Irf9Q61179 Asic1-205ENSMUST00000228185 1818 ntBASIC18.6■□□□□ 0.57
Irf9Q61179 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Irf9Q61179 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC18.6■□□□□ 0.57
Irf9Q61179 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Irf9Q61179 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Irf9Q61179 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Irf9Q61179 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC18.6■□□□□ 0.57
Irf9Q61179 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Irf9Q61179 Gm13015-201ENSMUST00000118674 204 ntBASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms