Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Slc6a4Q60857 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Slc6a4Q60857 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
Slc6a4Q60857 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Slc6a4Q60857 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Slc6a4Q60857 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Slc6a4Q60857 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Slc6a4Q60857 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Slc6a4Q60857 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC15.34■□□□□ 0.05
Slc6a4Q60857 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Slc6a4Q60857 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Slc6a4Q60857 AC154621.1-201ENSMUST00000226155 1119 ntBASIC15.34■□□□□ 0.05
Slc6a4Q60857 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Slc6a4Q60857 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Slc6a4Q60857 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Slc6a4Q60857 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC15.34■□□□□ 0.05
Slc6a4Q60857 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Slc6a4Q60857 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC15.34■□□□□ 0.05
Slc6a4Q60857 Gm43195-201ENSMUST00000200614 2332 ntBASIC15.34■□□□□ 0.05
Slc6a4Q60857 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Slc6a4Q60857 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Slc6a4Q60857 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Slc6a4Q60857 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Slc6a4Q60857 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Slc6a4Q60857 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Slc6a4Q60857 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Slc6a4Q60857 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC15.34■□□□□ 0.05
Slc6a4Q60857 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Slc6a4Q60857 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Slc6a4Q60857 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC15.34■□□□□ 0.05
Slc6a4Q60857 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Slc6a4Q60857 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Slc6a4Q60857 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Slc6a4Q60857 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Slc6a4Q60857 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Slc6a4Q60857 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Slc6a4Q60857 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Slc6a4Q60857 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC15.33■□□□□ 0.04
Slc6a4Q60857 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC15.33■□□□□ 0.04
Slc6a4Q60857 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
Slc6a4Q60857 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC15.33■□□□□ 0.04
Slc6a4Q60857 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC15.33■□□□□ 0.04
Slc6a4Q60857 AC139382.1-201ENSMUST00000221402 498 ntBASIC15.33■□□□□ 0.04
Slc6a4Q60857 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC15.33■□□□□ 0.04
Slc6a4Q60857 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Slc6a4Q60857 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
Slc6a4Q60857 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Slc6a4Q60857 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Slc6a4Q60857 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Slc6a4Q60857 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Slc6a4Q60857 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Slc6a4Q60857 Gm13233-201ENSMUST00000118760 1443 ntBASIC15.33■□□□□ 0.04
Slc6a4Q60857 Gm13244-201ENSMUST00000118855 1446 ntBASIC15.33■□□□□ 0.04
Slc6a4Q60857 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Slc6a4Q60857 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Slc6a4Q60857 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Slc6a4Q60857 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Slc6a4Q60857 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Slc6a4Q60857 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC15.32■□□□□ 0.04
Slc6a4Q60857 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc6a4Q60857 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc6a4Q60857 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc6a4Q60857 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc6a4Q60857 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC15.32■□□□□ 0.04
Slc6a4Q60857 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC15.32■□□□□ 0.04
Slc6a4Q60857 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc6a4Q60857 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc6a4Q60857 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc6a4Q60857 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC15.32■□□□□ 0.04
Slc6a4Q60857 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
Slc6a4Q60857 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Slc6a4Q60857 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc6a4Q60857 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc6a4Q60857 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Slc6a4Q60857 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Slc6a4Q60857 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc6a4Q60857 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc6a4Q60857 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc6a4Q60857 CT010478.1-201ENSMUST00000220747 2787 ntBASIC15.32■□□□□ 0.04
Slc6a4Q60857 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc6a4Q60857 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Slc6a4Q60857 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc6a4Q60857 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc6a4Q60857 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc6a4Q60857 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc6a4Q60857 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Slc6a4Q60857 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc6a4Q60857 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC15.31■□□□□ 0.04
Slc6a4Q60857 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Slc6a4Q60857 Gm14026-201ENSMUST00000120625 1789 ntBASIC15.31■□□□□ 0.04
Slc6a4Q60857 Asic1-205ENSMUST00000228185 1818 ntBASIC15.31■□□□□ 0.04
Slc6a4Q60857 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc6a4Q60857 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc6a4Q60857 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Slc6a4Q60857 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Slc6a4Q60857 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Slc6a4Q60857 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc6a4Q60857 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Slc6a4Q60857 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc6a4Q60857 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms