Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ClpbQ60649 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
ClpbQ60649 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
ClpbQ60649 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
ClpbQ60649 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.42□□□□□ -0.1
ClpbQ60649 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14.42□□□□□ -0.1
ClpbQ60649 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
ClpbQ60649 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ClpbQ60649 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ClpbQ60649 Gm11873-201ENSMUST00000117877 1304 ntBASIC14.41□□□□□ -0.1
ClpbQ60649 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ClpbQ60649 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
ClpbQ60649 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ClpbQ60649 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.41□□□□□ -0.1
ClpbQ60649 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ClpbQ60649 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ClpbQ60649 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ClpbQ60649 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ClpbQ60649 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
ClpbQ60649 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
ClpbQ60649 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ClpbQ60649 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ClpbQ60649 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ClpbQ60649 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.41□□□□□ -0.1
ClpbQ60649 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ClpbQ60649 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ClpbQ60649 Gm9727-201ENSMUST00000161387 555 ntBASIC14.41□□□□□ -0.1
ClpbQ60649 Gm2213-201ENSMUST00000197485 688 ntBASIC14.41□□□□□ -0.1
ClpbQ60649 Gm9682-201ENSMUST00000197505 556 ntBASIC14.41□□□□□ -0.1
ClpbQ60649 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC14.41□□□□□ -0.1
ClpbQ60649 Gm43073-201ENSMUST00000198200 1189 ntBASIC14.41□□□□□ -0.1
ClpbQ60649 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ClpbQ60649 AC131709.1-201ENSMUST00000224731 1180 ntBASIC14.41□□□□□ -0.1
ClpbQ60649 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ClpbQ60649 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
ClpbQ60649 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
ClpbQ60649 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.41□□□□□ -0.1
ClpbQ60649 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ClpbQ60649 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ClpbQ60649 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
ClpbQ60649 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ClpbQ60649 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ClpbQ60649 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ClpbQ60649 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ClpbQ60649 Efs-202ENSMUST00000227037 2540 ntBASIC14.41□□□□□ -0.1
ClpbQ60649 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
ClpbQ60649 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
ClpbQ60649 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
ClpbQ60649 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
ClpbQ60649 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ClpbQ60649 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
ClpbQ60649 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ClpbQ60649 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ClpbQ60649 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ClpbQ60649 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
ClpbQ60649 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
ClpbQ60649 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
ClpbQ60649 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ClpbQ60649 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
ClpbQ60649 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
ClpbQ60649 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
ClpbQ60649 Gm11779-201ENSMUST00000118541 368 ntBASIC14.4□□□□□ -0.1
ClpbQ60649 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.4□□□□□ -0.1
ClpbQ60649 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC14.4□□□□□ -0.1
ClpbQ60649 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC14.4□□□□□ -0.1
ClpbQ60649 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC14.4□□□□□ -0.1
ClpbQ60649 Gm5264-201ENSMUST00000190584 848 ntBASIC14.4□□□□□ -0.1
ClpbQ60649 Gm37935-201ENSMUST00000192012 982 ntBASIC14.4□□□□□ -0.1
ClpbQ60649 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC14.4□□□□□ -0.1
ClpbQ60649 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
ClpbQ60649 AC132104.2-201ENSMUST00000215011 266 ntBASIC14.4□□□□□ -0.1
ClpbQ60649 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC14.4□□□□□ -0.1
ClpbQ60649 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
ClpbQ60649 Gm5867-201ENSMUST00000063197 592 ntBASIC14.4□□□□□ -0.1
ClpbQ60649 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
ClpbQ60649 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
ClpbQ60649 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ClpbQ60649 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
ClpbQ60649 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
ClpbQ60649 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
ClpbQ60649 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.4□□□□□ -0.1
ClpbQ60649 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ClpbQ60649 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ClpbQ60649 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
ClpbQ60649 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
ClpbQ60649 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.11
ClpbQ60649 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.11
ClpbQ60649 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
ClpbQ60649 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
ClpbQ60649 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
ClpbQ60649 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
ClpbQ60649 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ClpbQ60649 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
ClpbQ60649 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ClpbQ60649 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
ClpbQ60649 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
ClpbQ60649 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.39□□□□□ -0.11
ClpbQ60649 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ClpbQ60649 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ClpbQ60649 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms