Protein–RNA interactions for Protein: Q5XF89

Atp13a3, Probable cation-transporting ATPase 13A3, mousemouse

Predictions only

Length 1,219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp13a3Q5XF89 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Atp13a3Q5XF89 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Atp13a3Q5XF89 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Atp13a3Q5XF89 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Atp13a3Q5XF89 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC16.91■□□□□ 0.3
Atp13a3Q5XF89 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Atp13a3Q5XF89 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Atp13a3Q5XF89 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Atp13a3Q5XF89 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
Atp13a3Q5XF89 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Atp13a3Q5XF89 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC16.91■□□□□ 0.3
Atp13a3Q5XF89 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC16.91■□□□□ 0.3
Atp13a3Q5XF89 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Atp13a3Q5XF89 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Atp13a3Q5XF89 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC16.91■□□□□ 0.3
Atp13a3Q5XF89 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Atp13a3Q5XF89 AC158529.1-201ENSMUST00000223618 239 ntBASIC16.91■□□□□ 0.3
Atp13a3Q5XF89 Rbfox2-208ENSMUST00000227930 1218 ntBASIC16.91■□□□□ 0.3
Atp13a3Q5XF89 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Atp13a3Q5XF89 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Atp13a3Q5XF89 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Atp13a3Q5XF89 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Atp13a3Q5XF89 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Atp13a3Q5XF89 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Atp13a3Q5XF89 AC159621.2-201ENSMUST00000223519 1326 ntBASIC16.91■□□□□ 0.3
Atp13a3Q5XF89 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Atp13a3Q5XF89 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Atp13a3Q5XF89 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Atp13a3Q5XF89 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Atp13a3Q5XF89 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Atp13a3Q5XF89 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Atp13a3Q5XF89 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.9■□□□□ 0.3
Atp13a3Q5XF89 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Atp13a3Q5XF89 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Atp13a3Q5XF89 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Atp13a3Q5XF89 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Atp13a3Q5XF89 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Atp13a3Q5XF89 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Atp13a3Q5XF89 Gm18766-201ENSMUST00000189811 808 ntBASIC16.9■□□□□ 0.3
Atp13a3Q5XF89 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Atp13a3Q5XF89 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Atp13a3Q5XF89 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Atp13a3Q5XF89 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC16.9■□□□□ 0.3
Atp13a3Q5XF89 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Atp13a3Q5XF89 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Atp13a3Q5XF89 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Atp13a3Q5XF89 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Atp13a3Q5XF89 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Atp13a3Q5XF89 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Atp13a3Q5XF89 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.89■□□□□ 0.3
Atp13a3Q5XF89 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Atp13a3Q5XF89 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Atp13a3Q5XF89 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC16.89■□□□□ 0.29
Atp13a3Q5XF89 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Atp13a3Q5XF89 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Atp13a3Q5XF89 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC16.89■□□□□ 0.29
Atp13a3Q5XF89 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Atp13a3Q5XF89 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Atp13a3Q5XF89 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Atp13a3Q5XF89 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Atp13a3Q5XF89 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC16.89■□□□□ 0.29
Atp13a3Q5XF89 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Atp13a3Q5XF89 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Atp13a3Q5XF89 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Atp13a3Q5XF89 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Atp13a3Q5XF89 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC16.89■□□□□ 0.29
Atp13a3Q5XF89 Gm5479-201ENSMUST00000160578 435 ntBASIC16.89■□□□□ 0.29
Atp13a3Q5XF89 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Atp13a3Q5XF89 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC16.89■□□□□ 0.29
Atp13a3Q5XF89 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Atp13a3Q5XF89 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Atp13a3Q5XF89 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
Atp13a3Q5XF89 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC16.89■□□□□ 0.29
Atp13a3Q5XF89 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Atp13a3Q5XF89 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
Atp13a3Q5XF89 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Atp13a3Q5XF89 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Atp13a3Q5XF89 Gm42466-201ENSMUST00000202099 1301 ntBASIC16.89■□□□□ 0.29
Atp13a3Q5XF89 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Atp13a3Q5XF89 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Atp13a3Q5XF89 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Atp13a3Q5XF89 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC16.89■□□□□ 0.29
Atp13a3Q5XF89 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Atp13a3Q5XF89 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Atp13a3Q5XF89 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Atp13a3Q5XF89 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Atp13a3Q5XF89 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Atp13a3Q5XF89 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC16.88■□□□□ 0.29
Atp13a3Q5XF89 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Atp13a3Q5XF89 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC16.88■□□□□ 0.29
Atp13a3Q5XF89 Gm28630-201ENSMUST00000187806 498 ntBASIC16.88■□□□□ 0.29
Atp13a3Q5XF89 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Atp13a3Q5XF89 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC16.88■□□□□ 0.29
Atp13a3Q5XF89 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Atp13a3Q5XF89 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Atp13a3Q5XF89 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Atp13a3Q5XF89 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Atp13a3Q5XF89 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Atp13a3Q5XF89 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Atp13a3Q5XF89 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms