Protein–RNA interactions for Protein: Q5U4C3

Scaf1, Splicing factor, arginine/serine-rich 19, mousemouse

Known RBP Predictions only

Length 1,256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf1Q5U4C3 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scaf1Q5U4C3 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scaf1Q5U4C3 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Scaf1Q5U4C3 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Scaf1Q5U4C3 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Scaf1Q5U4C3 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scaf1Q5U4C3 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC19.49■□□□□ 0.71
Scaf1Q5U4C3 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scaf1Q5U4C3 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Scaf1Q5U4C3 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC19.49■□□□□ 0.71
Scaf1Q5U4C3 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scaf1Q5U4C3 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC19.49■□□□□ 0.71
Scaf1Q5U4C3 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC19.49■□□□□ 0.71
Scaf1Q5U4C3 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scaf1Q5U4C3 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Scaf1Q5U4C3 AC140375.2-201ENSMUST00000225283 584 ntBASIC19.49■□□□□ 0.71
Scaf1Q5U4C3 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scaf1Q5U4C3 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Scaf1Q5U4C3 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scaf1Q5U4C3 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scaf1Q5U4C3 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Scaf1Q5U4C3 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Scaf1Q5U4C3 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Scaf1Q5U4C3 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Scaf1Q5U4C3 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC19.49■□□□□ 0.71
Scaf1Q5U4C3 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Scaf1Q5U4C3 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Scaf1Q5U4C3 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Scaf1Q5U4C3 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Scaf1Q5U4C3 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Scaf1Q5U4C3 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Scaf1Q5U4C3 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Scaf1Q5U4C3 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Scaf1Q5U4C3 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Scaf1Q5U4C3 Tcf21-202ENSMUST00000218002 1788 ntBASIC19.48■□□□□ 0.71
Scaf1Q5U4C3 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC19.48■□□□□ 0.71
Scaf1Q5U4C3 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Scaf1Q5U4C3 Gm7820-201ENSMUST00000121012 1052 ntBASIC19.48■□□□□ 0.71
Scaf1Q5U4C3 Gm9726-201ENSMUST00000180321 678 ntBASIC19.48■□□□□ 0.71
Scaf1Q5U4C3 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC19.48■□□□□ 0.71
Scaf1Q5U4C3 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Scaf1Q5U4C3 Asic1-205ENSMUST00000228185 1818 ntBASIC19.48■□□□□ 0.71
Scaf1Q5U4C3 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
Scaf1Q5U4C3 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC19.48■□□□□ 0.71
Scaf1Q5U4C3 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC19.48■□□□□ 0.71
Scaf1Q5U4C3 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Scaf1Q5U4C3 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Scaf1Q5U4C3 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scaf1Q5U4C3 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scaf1Q5U4C3 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scaf1Q5U4C3 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC19.47■□□□□ 0.71
Scaf1Q5U4C3 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scaf1Q5U4C3 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scaf1Q5U4C3 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scaf1Q5U4C3 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scaf1Q5U4C3 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scaf1Q5U4C3 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Scaf1Q5U4C3 Gm43703-201ENSMUST00000200523 763 ntBASIC19.47■□□□□ 0.71
Scaf1Q5U4C3 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scaf1Q5U4C3 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scaf1Q5U4C3 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scaf1Q5U4C3 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Scaf1Q5U4C3 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scaf1Q5U4C3 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scaf1Q5U4C3 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scaf1Q5U4C3 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC19.47■□□□□ 0.71
Scaf1Q5U4C3 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scaf1Q5U4C3 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scaf1Q5U4C3 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Scaf1Q5U4C3 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
Scaf1Q5U4C3 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scaf1Q5U4C3 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scaf1Q5U4C3 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Scaf1Q5U4C3 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Scaf1Q5U4C3 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Scaf1Q5U4C3 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC19.46■□□□□ 0.71
Scaf1Q5U4C3 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Scaf1Q5U4C3 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Scaf1Q5U4C3 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Scaf1Q5U4C3 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Scaf1Q5U4C3 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
Scaf1Q5U4C3 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
Scaf1Q5U4C3 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Scaf1Q5U4C3 Gm10275-202ENSMUST00000168697 495 ntBASIC19.46■□□□□ 0.71
Scaf1Q5U4C3 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Scaf1Q5U4C3 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Scaf1Q5U4C3 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Scaf1Q5U4C3 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Scaf1Q5U4C3 Gm10275-201ENSMUST00000092620 635 ntBASIC19.46■□□□□ 0.71
Scaf1Q5U4C3 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Scaf1Q5U4C3 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Scaf1Q5U4C3 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Scaf1Q5U4C3 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Scaf1Q5U4C3 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Scaf1Q5U4C3 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Scaf1Q5U4C3 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Scaf1Q5U4C3 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Scaf1Q5U4C3 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Scaf1Q5U4C3 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Scaf1Q5U4C3 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms