Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6d-4Q5R1I0 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6d-4Q5R1I0 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6d-4Q5R1I0 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6d-4Q5R1I0 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6d-4Q5R1I0 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6d-4Q5R1I0 Gm11839-201ENSMUST00000120647 1953 ntBASIC12.6□□□□□ -0.39
Trav6d-4Q5R1I0 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC12.6□□□□□ -0.39
Trav6d-4Q5R1I0 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6d-4Q5R1I0 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6d-4Q5R1I0 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trav6d-4Q5R1I0 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6d-4Q5R1I0 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6d-4Q5R1I0 Gm15593-201ENSMUST00000122085 1008 ntBASIC12.6□□□□□ -0.39
Trav6d-4Q5R1I0 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC12.6□□□□□ -0.39
Trav6d-4Q5R1I0 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Trav6d-4Q5R1I0 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC12.6□□□□□ -0.39
Trav6d-4Q5R1I0 Gm43767-201ENSMUST00000198933 381 ntBASIC12.6□□□□□ -0.39
Trav6d-4Q5R1I0 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC12.6□□□□□ -0.39
Trav6d-4Q5R1I0 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC12.6□□□□□ -0.39
Trav6d-4Q5R1I0 AC164567.1-201ENSMUST00000219185 960 ntBASIC12.6□□□□□ -0.39
Trav6d-4Q5R1I0 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6d-4Q5R1I0 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trav6d-4Q5R1I0 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6d-4Q5R1I0 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC12.6□□□□□ -0.39
Trav6d-4Q5R1I0 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6d-4Q5R1I0 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6d-4Q5R1I0 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6d-4Q5R1I0 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC12.6□□□□□ -0.39
Trav6d-4Q5R1I0 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trav6d-4Q5R1I0 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6d-4Q5R1I0 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6d-4Q5R1I0 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6d-4Q5R1I0 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6d-4Q5R1I0 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6d-4Q5R1I0 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6d-4Q5R1I0 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6d-4Q5R1I0 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6d-4Q5R1I0 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6d-4Q5R1I0 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6d-4Q5R1I0 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Trav6d-4Q5R1I0 Gm43352-201ENSMUST00000196419 3065 ntBASIC12.59□□□□□ -0.39
Trav6d-4Q5R1I0 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6d-4Q5R1I0 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6d-4Q5R1I0 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6d-4Q5R1I0 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC12.59□□□□□ -0.39
Trav6d-4Q5R1I0 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6d-4Q5R1I0 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6d-4Q5R1I0 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6d-4Q5R1I0 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Trav6d-4Q5R1I0 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6d-4Q5R1I0 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6d-4Q5R1I0 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6d-4Q5R1I0 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6d-4Q5R1I0 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6d-4Q5R1I0 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC12.59□□□□□ -0.39
Trav6d-4Q5R1I0 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Trav6d-4Q5R1I0 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6d-4Q5R1I0 Gm16026-204ENSMUST00000162652 683 ntBASIC12.59□□□□□ -0.39
Trav6d-4Q5R1I0 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6d-4Q5R1I0 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Trav6d-4Q5R1I0 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC12.59□□□□□ -0.39
Trav6d-4Q5R1I0 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6d-4Q5R1I0 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC12.59□□□□□ -0.39
Trav6d-4Q5R1I0 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6d-4Q5R1I0 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6d-4Q5R1I0 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6d-4Q5R1I0 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Trav6d-4Q5R1I0 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6d-4Q5R1I0 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6d-4Q5R1I0 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6d-4Q5R1I0 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6d-4Q5R1I0 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6d-4Q5R1I0 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6d-4Q5R1I0 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6d-4Q5R1I0 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6d-4Q5R1I0 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6d-4Q5R1I0 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6d-4Q5R1I0 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6d-4Q5R1I0 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6d-4Q5R1I0 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6d-4Q5R1I0 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6d-4Q5R1I0 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6d-4Q5R1I0 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6d-4Q5R1I0 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trav6d-4Q5R1I0 AC126250.1-201ENSMUST00000228343 1768 ntBASIC12.58□□□□□ -0.39
Trav6d-4Q5R1I0 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6d-4Q5R1I0 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6d-4Q5R1I0 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6d-4Q5R1I0 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC12.58□□□□□ -0.4
Trav6d-4Q5R1I0 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC12.58□□□□□ -0.4
Trav6d-4Q5R1I0 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6d-4Q5R1I0 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6d-4Q5R1I0 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6d-4Q5R1I0 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6d-4Q5R1I0 Gm11745-201ENSMUST00000121669 448 ntBASIC12.58□□□□□ -0.4
Trav6d-4Q5R1I0 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6d-4Q5R1I0 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC12.58□□□□□ -0.4
Trav6d-4Q5R1I0 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC12.58□□□□□ -0.4
Trav6d-4Q5R1I0 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms