Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-3Q5R1E6 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-3Q5R1E6 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-3Q5R1E6 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-3Q5R1E6 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-3Q5R1E6 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-3Q5R1E6 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-3Q5R1E6 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-3Q5R1E6 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Trav6-3Q5R1E6 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-3Q5R1E6 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-3Q5R1E6 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Trav6-3Q5R1E6 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-3Q5R1E6 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trav6-3Q5R1E6 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Trav6-3Q5R1E6 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-3Q5R1E6 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
Trav6-3Q5R1E6 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-3Q5R1E6 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC12.05□□□□□ -0.48
Trav6-3Q5R1E6 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Trav6-3Q5R1E6 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC12.05□□□□□ -0.48
Trav6-3Q5R1E6 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-3Q5R1E6 AC159301.1-201ENSMUST00000225130 1182 ntBASIC12.05□□□□□ -0.48
Trav6-3Q5R1E6 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-3Q5R1E6 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-3Q5R1E6 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-3Q5R1E6 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-3Q5R1E6 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-3Q5R1E6 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-3Q5R1E6 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-3Q5R1E6 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
Trav6-3Q5R1E6 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-3Q5R1E6 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC12.05□□□□□ -0.48
Trav6-3Q5R1E6 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-3Q5R1E6 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-3Q5R1E6 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trav6-3Q5R1E6 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-3Q5R1E6 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-3Q5R1E6 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-3Q5R1E6 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-3Q5R1E6 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-3Q5R1E6 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-3Q5R1E6 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-3Q5R1E6 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-3Q5R1E6 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-3Q5R1E6 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-3Q5R1E6 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-3Q5R1E6 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-3Q5R1E6 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-3Q5R1E6 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Trav6-3Q5R1E6 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-3Q5R1E6 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC12.04□□□□□ -0.48
Trav6-3Q5R1E6 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC12.04□□□□□ -0.48
Trav6-3Q5R1E6 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC12.04□□□□□ -0.48
Trav6-3Q5R1E6 Gm37153-201ENSMUST00000193637 231 ntBASIC12.04□□□□□ -0.48
Trav6-3Q5R1E6 AC159106.1-201ENSMUST00000224421 690 ntBASIC12.04□□□□□ -0.48
Trav6-3Q5R1E6 AC151836.1-202ENSMUST00000226259 753 ntBASIC12.04□□□□□ -0.48
Trav6-3Q5R1E6 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-3Q5R1E6 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-3Q5R1E6 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-3Q5R1E6 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Trav6-3Q5R1E6 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-3Q5R1E6 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-3Q5R1E6 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC12.04□□□□□ -0.48
Trav6-3Q5R1E6 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-3Q5R1E6 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-3Q5R1E6 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trav6-3Q5R1E6 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Trav6-3Q5R1E6 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-3Q5R1E6 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-3Q5R1E6 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
Trav6-3Q5R1E6 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-3Q5R1E6 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-3Q5R1E6 Gm43509-201ENSMUST00000196551 2594 ntBASIC12.04□□□□□ -0.48
Trav6-3Q5R1E6 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Trav6-3Q5R1E6 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-3Q5R1E6 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Trav6-3Q5R1E6 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-3Q5R1E6 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6-3Q5R1E6 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC12.03□□□□□ -0.48
Trav6-3Q5R1E6 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-3Q5R1E6 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-3Q5R1E6 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-3Q5R1E6 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-3Q5R1E6 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-3Q5R1E6 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-3Q5R1E6 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-3Q5R1E6 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-3Q5R1E6 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-3Q5R1E6 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC12.03□□□□□ -0.48
Trav6-3Q5R1E6 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-3Q5R1E6 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-3Q5R1E6 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-3Q5R1E6 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC12.03□□□□□ -0.48
Trav6-3Q5R1E6 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Trav6-3Q5R1E6 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC12.03□□□□□ -0.48
Trav6-3Q5R1E6 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-3Q5R1E6 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6-3Q5R1E6 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Trav6-3Q5R1E6 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms