Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scn2bQ56A07 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Scn2bQ56A07 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scn2bQ56A07 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scn2bQ56A07 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scn2bQ56A07 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Scn2bQ56A07 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scn2bQ56A07 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scn2bQ56A07 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Scn2bQ56A07 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.86□□□□□ -0.03
Scn2bQ56A07 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Scn2bQ56A07 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scn2bQ56A07 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Scn2bQ56A07 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scn2bQ56A07 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scn2bQ56A07 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scn2bQ56A07 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scn2bQ56A07 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scn2bQ56A07 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Scn2bQ56A07 Gm8097-201ENSMUST00000117903 829 ntBASIC14.85□□□□□ -0.03
Scn2bQ56A07 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Scn2bQ56A07 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC14.85□□□□□ -0.03
Scn2bQ56A07 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scn2bQ56A07 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Scn2bQ56A07 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Scn2bQ56A07 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC14.85□□□□□ -0.03
Scn2bQ56A07 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Scn2bQ56A07 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scn2bQ56A07 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Scn2bQ56A07 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
Scn2bQ56A07 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scn2bQ56A07 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.85□□□□□ -0.03
Scn2bQ56A07 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scn2bQ56A07 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scn2bQ56A07 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Scn2bQ56A07 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Scn2bQ56A07 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Scn2bQ56A07 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Scn2bQ56A07 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Scn2bQ56A07 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Scn2bQ56A07 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Scn2bQ56A07 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Scn2bQ56A07 Gm4535-201ENSMUST00000182274 558 ntBASIC14.84□□□□□ -0.03
Scn2bQ56A07 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Scn2bQ56A07 Gm18195-201ENSMUST00000207604 706 ntBASIC14.84□□□□□ -0.03
Scn2bQ56A07 Gm6296-201ENSMUST00000222599 943 ntBASIC14.84□□□□□ -0.03
Scn2bQ56A07 Mzt1-203ENSMUST00000227948 952 ntBASIC14.84□□□□□ -0.03
Scn2bQ56A07 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.84□□□□□ -0.03
Scn2bQ56A07 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Scn2bQ56A07 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Scn2bQ56A07 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Scn2bQ56A07 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC14.84□□□□□ -0.03
Scn2bQ56A07 Gm10355-201ENSMUST00000097146 517 ntBASIC14.84□□□□□ -0.03
Scn2bQ56A07 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Scn2bQ56A07 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Scn2bQ56A07 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Scn2bQ56A07 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Scn2bQ56A07 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Scn2bQ56A07 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Scn2bQ56A07 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Scn2bQ56A07 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Scn2bQ56A07 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Scn2bQ56A07 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Scn2bQ56A07 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Scn2bQ56A07 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Scn2bQ56A07 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Scn2bQ56A07 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Scn2bQ56A07 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Scn2bQ56A07 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Scn2bQ56A07 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Scn2bQ56A07 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Scn2bQ56A07 Gm7901-201ENSMUST00000120430 1597 ntBASIC14.83□□□□□ -0.04
Scn2bQ56A07 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC14.83□□□□□ -0.04
Scn2bQ56A07 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC14.83□□□□□ -0.04
Scn2bQ56A07 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Scn2bQ56A07 Gm27646-201ENSMUST00000183989 110 ntBASIC14.83□□□□□ -0.04
Scn2bQ56A07 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.83□□□□□ -0.04
Scn2bQ56A07 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC14.83□□□□□ -0.04
Scn2bQ56A07 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Scn2bQ56A07 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Scn2bQ56A07 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Scn2bQ56A07 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.83□□□□□ -0.04
Scn2bQ56A07 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.83□□□□□ -0.04
Scn2bQ56A07 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Scn2bQ56A07 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC14.83□□□□□ -0.04
Scn2bQ56A07 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Scn2bQ56A07 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Scn2bQ56A07 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC14.83□□□□□ -0.04
Scn2bQ56A07 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Scn2bQ56A07 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
Scn2bQ56A07 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Scn2bQ56A07 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
Scn2bQ56A07 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Scn2bQ56A07 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn2bQ56A07 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Scn2bQ56A07 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Scn2bQ56A07 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn2bQ56A07 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scn2bQ56A07 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Scn2bQ56A07 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms