Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Prpf38aQ4FK66 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Prpf38aQ4FK66 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Prpf38aQ4FK66 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Prpf38aQ4FK66 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
Prpf38aQ4FK66 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Prpf38aQ4FK66 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Prpf38aQ4FK66 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC17.49■□□□□ 0.39
Prpf38aQ4FK66 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Prpf38aQ4FK66 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Prpf38aQ4FK66 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Prpf38aQ4FK66 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Prpf38aQ4FK66 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Prpf38aQ4FK66 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
Prpf38aQ4FK66 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
Prpf38aQ4FK66 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Prpf38aQ4FK66 AA543401-201ENSMUST00000164248 1269 ntBASIC17.49■□□□□ 0.39
Prpf38aQ4FK66 Gm38225-201ENSMUST00000194001 393 ntBASIC17.49■□□□□ 0.39
Prpf38aQ4FK66 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC17.49■□□□□ 0.39
Prpf38aQ4FK66 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC17.49■□□□□ 0.39
Prpf38aQ4FK66 AC159114.1-201ENSMUST00000220349 266 ntBASIC17.49■□□□□ 0.39
Prpf38aQ4FK66 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Prpf38aQ4FK66 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Prpf38aQ4FK66 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Prpf38aQ4FK66 Gm11839-201ENSMUST00000120647 1953 ntBASIC17.49■□□□□ 0.39
Prpf38aQ4FK66 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Prpf38aQ4FK66 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Prpf38aQ4FK66 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Prpf38aQ4FK66 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Prpf38aQ4FK66 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Prpf38aQ4FK66 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Prpf38aQ4FK66 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Prpf38aQ4FK66 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Prpf38aQ4FK66 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Prpf38aQ4FK66 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Prpf38aQ4FK66 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC17.48■□□□□ 0.39
Prpf38aQ4FK66 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Prpf38aQ4FK66 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Prpf38aQ4FK66 Gm27920-201ENSMUST00000183953 96 ntBASIC17.48■□□□□ 0.39
Prpf38aQ4FK66 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Prpf38aQ4FK66 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC17.48■□□□□ 0.39
Prpf38aQ4FK66 Mxra8os-201ENSMUST00000097740 687 ntBASIC17.48■□□□□ 0.39
Prpf38aQ4FK66 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Prpf38aQ4FK66 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Prpf38aQ4FK66 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Prpf38aQ4FK66 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Prpf38aQ4FK66 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Prpf38aQ4FK66 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC17.48■□□□□ 0.39
Prpf38aQ4FK66 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Prpf38aQ4FK66 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Prpf38aQ4FK66 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC17.48■□□□□ 0.39
Prpf38aQ4FK66 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Prpf38aQ4FK66 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Prpf38aQ4FK66 Gm42934-201ENSMUST00000196920 1345 ntBASIC17.47■□□□□ 0.39
Prpf38aQ4FK66 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC17.47■□□□□ 0.39
Prpf38aQ4FK66 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Prpf38aQ4FK66 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Prpf38aQ4FK66 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Prpf38aQ4FK66 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Prpf38aQ4FK66 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC17.47■□□□□ 0.39
Prpf38aQ4FK66 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Prpf38aQ4FK66 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Prpf38aQ4FK66 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Prpf38aQ4FK66 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC17.47■□□□□ 0.39
Prpf38aQ4FK66 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Prpf38aQ4FK66 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Prpf38aQ4FK66 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Prpf38aQ4FK66 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Prpf38aQ4FK66 Gm22175-201ENSMUST00000175007 78 ntBASIC17.47■□□□□ 0.39
Prpf38aQ4FK66 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Prpf38aQ4FK66 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Prpf38aQ4FK66 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Prpf38aQ4FK66 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Prpf38aQ4FK66 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Prpf38aQ4FK66 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Prpf38aQ4FK66 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Prpf38aQ4FK66 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
Prpf38aQ4FK66 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC17.47■□□□□ 0.39
Prpf38aQ4FK66 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Prpf38aQ4FK66 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Prpf38aQ4FK66 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Prpf38aQ4FK66 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Prpf38aQ4FK66 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Prpf38aQ4FK66 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Prpf38aQ4FK66 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Prpf38aQ4FK66 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Prpf38aQ4FK66 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prpf38aQ4FK66 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Prpf38aQ4FK66 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prpf38aQ4FK66 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Prpf38aQ4FK66 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Prpf38aQ4FK66 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prpf38aQ4FK66 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.46■□□□□ 0.39
Prpf38aQ4FK66 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prpf38aQ4FK66 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC17.46■□□□□ 0.39
Prpf38aQ4FK66 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC17.46■□□□□ 0.39
Prpf38aQ4FK66 Gm7336-201ENSMUST00000107041 1232 ntBASIC17.46■□□□□ 0.39
Prpf38aQ4FK66 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prpf38aQ4FK66 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prpf38aQ4FK66 Gm27430-201ENSMUST00000184585 107 ntBASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms