Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 AC123645.1-201ENSMUST00000228469 605 ntBASIC18.4■□□□□ 0.54
Shank3Q4ACU6 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Shank3Q4ACU6 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Shank3Q4ACU6 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Shank3Q4ACU6 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Shank3Q4ACU6 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Shank3Q4ACU6 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Shank3Q4ACU6 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Shank3Q4ACU6 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC18.39■□□□□ 0.53
Shank3Q4ACU6 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
Shank3Q4ACU6 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Shank3Q4ACU6 Mir7654-201ENSMUST00000185082 70 ntBASIC18.39■□□□□ 0.53
Shank3Q4ACU6 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Shank3Q4ACU6 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Shank3Q4ACU6 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Shank3Q4ACU6 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Shank3Q4ACU6 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC18.39■□□□□ 0.53
Shank3Q4ACU6 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Shank3Q4ACU6 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Shank3Q4ACU6 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Shank3Q4ACU6 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC18.38■□□□□ 0.53
Shank3Q4ACU6 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Shank3Q4ACU6 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Shank3Q4ACU6 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Shank3Q4ACU6 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Shank3Q4ACU6 Gm8749-201ENSMUST00000117737 331 ntBASIC18.38■□□□□ 0.53
Shank3Q4ACU6 Mir1894-201ENSMUST00000122802 81 ntBASIC18.38■□□□□ 0.53
Shank3Q4ACU6 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Shank3Q4ACU6 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Shank3Q4ACU6 AC154846.1-201ENSMUST00000226278 862 ntBASIC18.38■□□□□ 0.53
Shank3Q4ACU6 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Shank3Q4ACU6 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Shank3Q4ACU6 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Shank3Q4ACU6 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Shank3Q4ACU6 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Shank3Q4ACU6 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Shank3Q4ACU6 Gm44616-201ENSMUST00000206417 1732 ntBASIC18.38■□□□□ 0.53
Shank3Q4ACU6 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Shank3Q4ACU6 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Shank3Q4ACU6 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Shank3Q4ACU6 Gm13226-201ENSMUST00000117838 404 ntBASIC18.37■□□□□ 0.53
Shank3Q4ACU6 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC18.37■□□□□ 0.53
Shank3Q4ACU6 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
Shank3Q4ACU6 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Shank3Q4ACU6 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Shank3Q4ACU6 Gm45331-201ENSMUST00000209868 554 ntBASIC18.37■□□□□ 0.53
Shank3Q4ACU6 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Shank3Q4ACU6 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Shank3Q4ACU6 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Shank3Q4ACU6 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC18.37■□□□□ 0.53
Shank3Q4ACU6 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Shank3Q4ACU6 AC093043.3-201ENSMUST00000226531 2273 ntBASIC18.37■□□□□ 0.53
Shank3Q4ACU6 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC18.37■□□□□ 0.53
Shank3Q4ACU6 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Shank3Q4ACU6 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Shank3Q4ACU6 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC18.37■□□□□ 0.53
Shank3Q4ACU6 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC18.37■□□□□ 0.53
Shank3Q4ACU6 Gm8062-201ENSMUST00000139696 444 ntBASIC18.37■□□□□ 0.53
Shank3Q4ACU6 Gm5279-201ENSMUST00000199575 745 ntBASIC18.37■□□□□ 0.53
Shank3Q4ACU6 Gm8463-201ENSMUST00000208573 613 ntBASIC18.37■□□□□ 0.53
Shank3Q4ACU6 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Shank3Q4ACU6 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Shank3Q4ACU6 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Shank3Q4ACU6 Gm14452-201ENSMUST00000118680 1632 ntBASIC18.37■□□□□ 0.53
Shank3Q4ACU6 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Shank3Q4ACU6 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Shank3Q4ACU6 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Shank3Q4ACU6 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Shank3Q4ACU6 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Shank3Q4ACU6 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Shank3Q4ACU6 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC18.36■□□□□ 0.53
Shank3Q4ACU6 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Shank3Q4ACU6 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Shank3Q4ACU6 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Shank3Q4ACU6 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC18.36■□□□□ 0.53
Shank3Q4ACU6 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Shank3Q4ACU6 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Shank3Q4ACU6 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Shank3Q4ACU6 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Shank3Q4ACU6 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC18.36■□□□□ 0.53
Shank3Q4ACU6 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Shank3Q4ACU6 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Shank3Q4ACU6 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Shank3Q4ACU6 Gm28911-201ENSMUST00000188837 117 ntBASIC18.36■□□□□ 0.53
Shank3Q4ACU6 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC18.36■□□□□ 0.53
Shank3Q4ACU6 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Shank3Q4ACU6 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
Shank3Q4ACU6 Gm13392-201ENSMUST00000117708 150 ntBASIC18.35■□□□□ 0.53
Shank3Q4ACU6 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Shank3Q4ACU6 Gm27839-201ENSMUST00000184242 106 ntBASIC18.35■□□□□ 0.53
Shank3Q4ACU6 AC121804.3-201ENSMUST00000223420 295 ntBASIC18.35■□□□□ 0.53
Shank3Q4ACU6 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC18.35■□□□□ 0.53
Shank3Q4ACU6 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Shank3Q4ACU6 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Shank3Q4ACU6 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Shank3Q4ACU6 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Shank3Q4ACU6 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Shank3Q4ACU6 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Shank3Q4ACU6 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Shank3Q4ACU6 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms