Protein–RNA interactions for Protein: Q3V0M8

BC051142, Testis specific basic protein, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC051142Q3V0M8 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
BC051142Q3V0M8 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
BC051142Q3V0M8 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
BC051142Q3V0M8 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
BC051142Q3V0M8 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
BC051142Q3V0M8 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
BC051142Q3V0M8 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
BC051142Q3V0M8 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
BC051142Q3V0M8 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
BC051142Q3V0M8 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
BC051142Q3V0M8 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BC051142Q3V0M8 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
BC051142Q3V0M8 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
BC051142Q3V0M8 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
BC051142Q3V0M8 Best4-ps-201ENSMUST00000129783 1380 ntBASIC16.04■□□□□ 0.16
BC051142Q3V0M8 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
BC051142Q3V0M8 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BC051142Q3V0M8 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC16.04■□□□□ 0.16
BC051142Q3V0M8 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC16.04■□□□□ 0.16
BC051142Q3V0M8 Gm43935-201ENSMUST00000203569 1050 ntBASIC16.04■□□□□ 0.16
BC051142Q3V0M8 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
BC051142Q3V0M8 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BC051142Q3V0M8 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BC051142Q3V0M8 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BC051142Q3V0M8 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
BC051142Q3V0M8 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BC051142Q3V0M8 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
BC051142Q3V0M8 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
BC051142Q3V0M8 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC16.04■□□□□ 0.16
BC051142Q3V0M8 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BC051142Q3V0M8 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC16.04■□□□□ 0.16
BC051142Q3V0M8 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
BC051142Q3V0M8 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
BC051142Q3V0M8 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
BC051142Q3V0M8 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
BC051142Q3V0M8 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
BC051142Q3V0M8 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
BC051142Q3V0M8 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
BC051142Q3V0M8 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
BC051142Q3V0M8 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
BC051142Q3V0M8 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
BC051142Q3V0M8 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
BC051142Q3V0M8 AC130669.1-201ENSMUST00000228537 1672 ntBASIC16.03■□□□□ 0.16
BC051142Q3V0M8 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
BC051142Q3V0M8 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
BC051142Q3V0M8 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
BC051142Q3V0M8 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
BC051142Q3V0M8 Mir5131-201ENSMUST00000175426 93 ntBASIC16.03■□□□□ 0.16
BC051142Q3V0M8 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
BC051142Q3V0M8 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC16.03■□□□□ 0.16
BC051142Q3V0M8 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC16.03■□□□□ 0.16
BC051142Q3V0M8 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
BC051142Q3V0M8 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
BC051142Q3V0M8 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC16.03■□□□□ 0.16
BC051142Q3V0M8 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
BC051142Q3V0M8 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
BC051142Q3V0M8 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
BC051142Q3V0M8 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
BC051142Q3V0M8 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
BC051142Q3V0M8 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
BC051142Q3V0M8 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
BC051142Q3V0M8 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
BC051142Q3V0M8 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
BC051142Q3V0M8 Gm42632-201ENSMUST00000201707 2411 ntBASIC16.03■□□□□ 0.16
BC051142Q3V0M8 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
BC051142Q3V0M8 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
BC051142Q3V0M8 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC16.02■□□□□ 0.16
BC051142Q3V0M8 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
BC051142Q3V0M8 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.16
BC051142Q3V0M8 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
BC051142Q3V0M8 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
BC051142Q3V0M8 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
BC051142Q3V0M8 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
BC051142Q3V0M8 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
BC051142Q3V0M8 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
BC051142Q3V0M8 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
BC051142Q3V0M8 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
BC051142Q3V0M8 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
BC051142Q3V0M8 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
BC051142Q3V0M8 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
BC051142Q3V0M8 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC16.02■□□□□ 0.16
BC051142Q3V0M8 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
BC051142Q3V0M8 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC16.02■□□□□ 0.16
BC051142Q3V0M8 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC16.02■□□□□ 0.16
BC051142Q3V0M8 AV026068-213ENSMUST00000223675 1171 ntBASIC16.02■□□□□ 0.16
BC051142Q3V0M8 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
BC051142Q3V0M8 Gm15590-201ENSMUST00000078419 552 ntBASIC16.02■□□□□ 0.16
BC051142Q3V0M8 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC16.02■□□□□ 0.16
BC051142Q3V0M8 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
BC051142Q3V0M8 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
BC051142Q3V0M8 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
BC051142Q3V0M8 Carlr-201ENSMUST00000181515 2574 ntBASIC16.02■□□□□ 0.15
BC051142Q3V0M8 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
BC051142Q3V0M8 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
BC051142Q3V0M8 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
BC051142Q3V0M8 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
BC051142Q3V0M8 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
BC051142Q3V0M8 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
BC051142Q3V0M8 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
BC051142Q3V0M8 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms