Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC15.55■□□□□ 0.08
Trim80Q3V061 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trim80Q3V061 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trim80Q3V061 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC15.55■□□□□ 0.08
Trim80Q3V061 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC15.55■□□□□ 0.08
Trim80Q3V061 AW822252-206ENSMUST00000208904 237 ntBASIC15.55■□□□□ 0.08
Trim80Q3V061 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim80Q3V061 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim80Q3V061 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC15.55■□□□□ 0.08
Trim80Q3V061 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim80Q3V061 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
Trim80Q3V061 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim80Q3V061 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim80Q3V061 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim80Q3V061 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim80Q3V061 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim80Q3V061 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Trim80Q3V061 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim80Q3V061 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim80Q3V061 AC148324.1-201ENSMUST00000219034 4240 ntBASIC15.54■□□□□ 0.08
Trim80Q3V061 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Trim80Q3V061 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC15.54■□□□□ 0.08
Trim80Q3V061 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim80Q3V061 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim80Q3V061 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim80Q3V061 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim80Q3V061 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trim80Q3V061 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim80Q3V061 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trim80Q3V061 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim80Q3V061 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trim80Q3V061 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trim80Q3V061 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim80Q3V061 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC15.54■□□□□ 0.08
Trim80Q3V061 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim80Q3V061 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
Trim80Q3V061 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim80Q3V061 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
Trim80Q3V061 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trim80Q3V061 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim80Q3V061 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trim80Q3V061 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trim80Q3V061 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Trim80Q3V061 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim80Q3V061 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trim80Q3V061 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim80Q3V061 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trim80Q3V061 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Trim80Q3V061 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Trim80Q3V061 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim80Q3V061 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim80Q3V061 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim80Q3V061 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trim80Q3V061 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trim80Q3V061 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim80Q3V061 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim80Q3V061 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim80Q3V061 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trim80Q3V061 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trim80Q3V061 Gm9449-201ENSMUST00000207265 1011 ntBASIC15.53■□□□□ 0.08
Trim80Q3V061 AC108846.1-201ENSMUST00000214531 513 ntBASIC15.53■□□□□ 0.08
Trim80Q3V061 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim80Q3V061 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim80Q3V061 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim80Q3V061 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC15.53■□□□□ 0.08
Trim80Q3V061 Rps4l-201ENSMUST00000071745 943 ntBASIC15.53■□□□□ 0.08
Trim80Q3V061 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim80Q3V061 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Trim80Q3V061 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim80Q3V061 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC15.53■□□□□ 0.08
Trim80Q3V061 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim80Q3V061 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim80Q3V061 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim80Q3V061 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim80Q3V061 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim80Q3V061 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Trim80Q3V061 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC15.52■□□□□ 0.08
Trim80Q3V061 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim80Q3V061 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim80Q3V061 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trim80Q3V061 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim80Q3V061 Gm45504-201ENSMUST00000211407 2107 ntBASIC15.52■□□□□ 0.08
Trim80Q3V061 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC15.52■□□□□ 0.08
Trim80Q3V061 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim80Q3V061 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Trim80Q3V061 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim80Q3V061 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
Trim80Q3V061 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC15.52■□□□□ 0.08
Trim80Q3V061 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC15.52■□□□□ 0.08
Trim80Q3V061 Rprl3-201ENSMUST00000157400 290 ntBASIC15.52■□□□□ 0.08
Trim80Q3V061 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Trim80Q3V061 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC15.52■□□□□ 0.08
Trim80Q3V061 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC15.52■□□□□ 0.08
Trim80Q3V061 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trim80Q3V061 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trim80Q3V061 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim80Q3V061 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim80Q3V061 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim80Q3V061 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trim80Q3V061 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms