Protein–RNA interactions for Protein: Q3V036

Ccdc27, Coiled-coil domain-containing protein 27, mousemouse

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc27Q3V036 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc27Q3V036 Gm7506-201ENSMUST00000207758 815 ntBASIC19.18■□□□□ 0.66
Ccdc27Q3V036 AC117588.1-201ENSMUST00000228510 999 ntBASIC19.18■□□□□ 0.66
Ccdc27Q3V036 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc27Q3V036 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc27Q3V036 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Ccdc27Q3V036 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc27Q3V036 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Ccdc27Q3V036 Gm13337-201ENSMUST00000119183 1594 ntBASIC19.18■□□□□ 0.66
Ccdc27Q3V036 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Ccdc27Q3V036 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Ccdc27Q3V036 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc27Q3V036 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc27Q3V036 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc27Q3V036 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
Ccdc27Q3V036 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc27Q3V036 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc27Q3V036 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
Ccdc27Q3V036 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc27Q3V036 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Ccdc27Q3V036 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc27Q3V036 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc27Q3V036 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc27Q3V036 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc27Q3V036 Gm4459-201ENSMUST00000118750 468 ntBASIC19.17■□□□□ 0.66
Ccdc27Q3V036 Gm12497-201ENSMUST00000138778 237 ntBASIC19.17■□□□□ 0.66
Ccdc27Q3V036 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC19.17■□□□□ 0.66
Ccdc27Q3V036 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC19.17■□□□□ 0.66
Ccdc27Q3V036 Gm17807-201ENSMUST00000186869 298 ntBASIC19.17■□□□□ 0.66
Ccdc27Q3V036 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc27Q3V036 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc27Q3V036 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc27Q3V036 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
Ccdc27Q3V036 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc27Q3V036 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC19.17■□□□□ 0.66
Ccdc27Q3V036 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc27Q3V036 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
Ccdc27Q3V036 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc27Q3V036 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc27Q3V036 Nupl1-207ENSMUST00000225311 2475 ntBASIC19.16■□□□□ 0.66
Ccdc27Q3V036 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc27Q3V036 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc27Q3V036 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc27Q3V036 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc27Q3V036 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc27Q3V036 Gm38042-201ENSMUST00000191614 5208 ntBASIC19.16■□□□□ 0.66
Ccdc27Q3V036 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc27Q3V036 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC19.16■□□□□ 0.66
Ccdc27Q3V036 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC19.16■□□□□ 0.66
Ccdc27Q3V036 Gm18622-201ENSMUST00000219361 595 ntBASIC19.16■□□□□ 0.66
Ccdc27Q3V036 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
Ccdc27Q3V036 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC19.16■□□□□ 0.66
Ccdc27Q3V036 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc27Q3V036 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc27Q3V036 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
Ccdc27Q3V036 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc27Q3V036 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc27Q3V036 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc27Q3V036 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc27Q3V036 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc27Q3V036 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc27Q3V036 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC19.15■□□□□ 0.66
Ccdc27Q3V036 Fbxl12-205ENSMUST00000140702 1555 ntBASIC19.15■□□□□ 0.66
Ccdc27Q3V036 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc27Q3V036 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc27Q3V036 Gm19164-201ENSMUST00000210667 640 ntBASIC19.15■□□□□ 0.66
Ccdc27Q3V036 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc27Q3V036 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc27Q3V036 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc27Q3V036 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC19.15■□□□□ 0.66
Ccdc27Q3V036 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Ccdc27Q3V036 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc27Q3V036 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc27Q3V036 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc27Q3V036 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc27Q3V036 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ccdc27Q3V036 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ccdc27Q3V036 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc27Q3V036 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc27Q3V036 Gm11839-201ENSMUST00000120647 1953 ntBASIC19.14■□□□□ 0.65
Ccdc27Q3V036 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc27Q3V036 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC19.14■□□□□ 0.65
Ccdc27Q3V036 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc27Q3V036 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc27Q3V036 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC19.14■□□□□ 0.65
Ccdc27Q3V036 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Ccdc27Q3V036 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc27Q3V036 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Ccdc27Q3V036 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Ccdc27Q3V036 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc27Q3V036 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc27Q3V036 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc27Q3V036 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc27Q3V036 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc27Q3V036 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc27Q3V036 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Ccdc27Q3V036 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc27Q3V036 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc27Q3V036 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc27Q3V036 AC122901.1-201ENSMUST00000214203 1790 ntBASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms