Protein–RNA interactions for Protein: Q3UZ39

Lrrfip1, Leucine-rich repeat flightless-interacting protein 1, mousemouse

Known RBP Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrfip1Q3UZ39 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Lrrfip1Q3UZ39 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Lrrfip1Q3UZ39 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Lrrfip1Q3UZ39 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Lrrfip1Q3UZ39 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lrrfip1Q3UZ39 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lrrfip1Q3UZ39 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lrrfip1Q3UZ39 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Lrrfip1Q3UZ39 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC17.05■□□□□ 0.32
Lrrfip1Q3UZ39 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC17.05■□□□□ 0.32
Lrrfip1Q3UZ39 Gm44945-201ENSMUST00000206764 1187 ntBASIC17.05■□□□□ 0.32
Lrrfip1Q3UZ39 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lrrfip1Q3UZ39 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lrrfip1Q3UZ39 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lrrfip1Q3UZ39 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lrrfip1Q3UZ39 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lrrfip1Q3UZ39 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lrrfip1Q3UZ39 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lrrfip1Q3UZ39 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lrrfip1Q3UZ39 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lrrfip1Q3UZ39 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Lrrfip1Q3UZ39 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lrrfip1Q3UZ39 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC17.04■□□□□ 0.32
Lrrfip1Q3UZ39 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Lrrfip1Q3UZ39 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lrrfip1Q3UZ39 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lrrfip1Q3UZ39 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC17.04■□□□□ 0.32
Lrrfip1Q3UZ39 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lrrfip1Q3UZ39 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Lrrfip1Q3UZ39 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lrrfip1Q3UZ39 Mir8117-201ENSMUST00000184773 107 ntBASIC17.04■□□□□ 0.32
Lrrfip1Q3UZ39 Gm2213-201ENSMUST00000197485 688 ntBASIC17.04■□□□□ 0.32
Lrrfip1Q3UZ39 Bloc1s5-203ENSMUST00000224902 612 ntBASIC17.04■□□□□ 0.32
Lrrfip1Q3UZ39 CT009510.1-201ENSMUST00000227972 270 ntBASIC17.04■□□□□ 0.32
Lrrfip1Q3UZ39 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lrrfip1Q3UZ39 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Lrrfip1Q3UZ39 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lrrfip1Q3UZ39 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Lrrfip1Q3UZ39 Gm10584-201ENSMUST00000207036 2628 ntBASIC17.04■□□□□ 0.32
Lrrfip1Q3UZ39 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lrrfip1Q3UZ39 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Lrrfip1Q3UZ39 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
Lrrfip1Q3UZ39 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Lrrfip1Q3UZ39 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC17.04■□□□□ 0.32
Lrrfip1Q3UZ39 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lrrfip1Q3UZ39 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lrrfip1Q3UZ39 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lrrfip1Q3UZ39 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lrrfip1Q3UZ39 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC17.03■□□□□ 0.32
Lrrfip1Q3UZ39 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Lrrfip1Q3UZ39 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC17.03■□□□□ 0.32
Lrrfip1Q3UZ39 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC17.03■□□□□ 0.32
Lrrfip1Q3UZ39 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lrrfip1Q3UZ39 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lrrfip1Q3UZ39 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lrrfip1Q3UZ39 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lrrfip1Q3UZ39 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lrrfip1Q3UZ39 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
Lrrfip1Q3UZ39 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lrrfip1Q3UZ39 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Lrrfip1Q3UZ39 AC130669.1-201ENSMUST00000228537 1672 ntBASIC17.03■□□□□ 0.32
Lrrfip1Q3UZ39 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lrrfip1Q3UZ39 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lrrfip1Q3UZ39 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lrrfip1Q3UZ39 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lrrfip1Q3UZ39 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lrrfip1Q3UZ39 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lrrfip1Q3UZ39 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Lrrfip1Q3UZ39 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Lrrfip1Q3UZ39 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Lrrfip1Q3UZ39 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Lrrfip1Q3UZ39 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Lrrfip1Q3UZ39 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Lrrfip1Q3UZ39 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Lrrfip1Q3UZ39 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Lrrfip1Q3UZ39 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Lrrfip1Q3UZ39 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Lrrfip1Q3UZ39 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Lrrfip1Q3UZ39 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
Lrrfip1Q3UZ39 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Lrrfip1Q3UZ39 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Lrrfip1Q3UZ39 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Lrrfip1Q3UZ39 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Lrrfip1Q3UZ39 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Lrrfip1Q3UZ39 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Lrrfip1Q3UZ39 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Lrrfip1Q3UZ39 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Lrrfip1Q3UZ39 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Lrrfip1Q3UZ39 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Lrrfip1Q3UZ39 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Lrrfip1Q3UZ39 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Lrrfip1Q3UZ39 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Lrrfip1Q3UZ39 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Lrrfip1Q3UZ39 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Lrrfip1Q3UZ39 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Lrrfip1Q3UZ39 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Lrrfip1Q3UZ39 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Lrrfip1Q3UZ39 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Lrrfip1Q3UZ39 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lrrfip1Q3UZ39 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms