Protein–RNA interactions for Protein: Q3U827

Rnf180, E3 ubiquitin-protein ligase RNF180, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf180Q3U827 AC069562.2-201ENSMUST00000224644 2146 ntBASIC17.43■□□□□ 0.38
Rnf180Q3U827 Cts7-204ENSMUST00000225321 1257 ntBASIC17.43■□□□□ 0.38
Rnf180Q3U827 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Rnf180Q3U827 Tfap2a-203ENSMUST00000223869 2037 ntBASIC17.43■□□□□ 0.38
Rnf180Q3U827 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf180Q3U827 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf180Q3U827 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Rnf180Q3U827 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC17.43■□□□□ 0.38
Rnf180Q3U827 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf180Q3U827 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf180Q3U827 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf180Q3U827 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf180Q3U827 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rnf180Q3U827 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf180Q3U827 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf180Q3U827 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf180Q3U827 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf180Q3U827 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf180Q3U827 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC17.42■□□□□ 0.38
Rnf180Q3U827 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Rnf180Q3U827 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC17.42■□□□□ 0.38
Rnf180Q3U827 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC17.42■□□□□ 0.38
Rnf180Q3U827 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf180Q3U827 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Rnf180Q3U827 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Rnf180Q3U827 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf180Q3U827 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf180Q3U827 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf180Q3U827 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf180Q3U827 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rnf180Q3U827 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Rnf180Q3U827 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf180Q3U827 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf180Q3U827 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf180Q3U827 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf180Q3U827 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf180Q3U827 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC17.41■□□□□ 0.38
Rnf180Q3U827 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf180Q3U827 Gm12749-201ENSMUST00000122138 1159 ntBASIC17.41■□□□□ 0.38
Rnf180Q3U827 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC17.41■□□□□ 0.38
Rnf180Q3U827 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf180Q3U827 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf180Q3U827 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC17.41■□□□□ 0.38
Rnf180Q3U827 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf180Q3U827 Gm38671-201ENSMUST00000200573 130 ntBASIC17.41■□□□□ 0.38
Rnf180Q3U827 Gm18935-201ENSMUST00000212692 664 ntBASIC17.41■□□□□ 0.38
Rnf180Q3U827 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf180Q3U827 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf180Q3U827 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf180Q3U827 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf180Q3U827 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf180Q3U827 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf180Q3U827 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf180Q3U827 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf180Q3U827 Iqck-206ENSMUST00000208658 2891 ntBASIC17.41■□□□□ 0.38
Rnf180Q3U827 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf180Q3U827 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf180Q3U827 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf180Q3U827 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC17.4■□□□□ 0.38
Rnf180Q3U827 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC17.4■□□□□ 0.38
Rnf180Q3U827 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf180Q3U827 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf180Q3U827 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf180Q3U827 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC17.4■□□□□ 0.38
Rnf180Q3U827 Gm37259-201ENSMUST00000193903 849 ntBASIC17.4■□□□□ 0.38
Rnf180Q3U827 Ighv1-25-201ENSMUST00000195638 345 ntBASIC17.4■□□□□ 0.38
Rnf180Q3U827 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC17.4■□□□□ 0.38
Rnf180Q3U827 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC17.4■□□□□ 0.38
Rnf180Q3U827 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf180Q3U827 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf180Q3U827 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf180Q3U827 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf180Q3U827 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf180Q3U827 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Rnf180Q3U827 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC17.4■□□□□ 0.38
Rnf180Q3U827 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf180Q3U827 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf180Q3U827 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Rnf180Q3U827 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Rnf180Q3U827 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf180Q3U827 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf180Q3U827 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf180Q3U827 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf180Q3U827 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf180Q3U827 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
Rnf180Q3U827 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC17.39■□□□□ 0.37
Rnf180Q3U827 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC17.39■□□□□ 0.37
Rnf180Q3U827 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC17.39■□□□□ 0.37
Rnf180Q3U827 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf180Q3U827 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Rnf180Q3U827 AC140406.1-201ENSMUST00000226481 465 ntBASIC17.39■□□□□ 0.37
Rnf180Q3U827 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Rnf180Q3U827 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC17.39■□□□□ 0.37
Rnf180Q3U827 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf180Q3U827 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
Rnf180Q3U827 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf180Q3U827 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf180Q3U827 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf180Q3U827 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC17.39■□□□□ 0.37
Rnf180Q3U827 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms