Protein–RNA interactions for Protein: Q3TJD7

Pdlim7, PDZ and LIM domain protein 7, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim7Q3TJD7 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
Pdlim7Q3TJD7 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pdlim7Q3TJD7 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pdlim7Q3TJD7 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pdlim7Q3TJD7 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC16.75■□□□□ 0.27
Pdlim7Q3TJD7 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC16.75■□□□□ 0.27
Pdlim7Q3TJD7 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC16.75■□□□□ 0.27
Pdlim7Q3TJD7 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC16.75■□□□□ 0.27
Pdlim7Q3TJD7 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC16.75■□□□□ 0.27
Pdlim7Q3TJD7 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pdlim7Q3TJD7 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC16.75■□□□□ 0.27
Pdlim7Q3TJD7 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
Pdlim7Q3TJD7 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pdlim7Q3TJD7 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pdlim7Q3TJD7 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pdlim7Q3TJD7 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC16.75■□□□□ 0.27
Pdlim7Q3TJD7 Gm18062-201ENSMUST00000208020 547 ntBASIC16.75■□□□□ 0.27
Pdlim7Q3TJD7 Gm18055-201ENSMUST00000208254 547 ntBASIC16.75■□□□□ 0.27
Pdlim7Q3TJD7 Gm46209-201ENSMUST00000217912 553 ntBASIC16.75■□□□□ 0.27
Pdlim7Q3TJD7 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pdlim7Q3TJD7 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pdlim7Q3TJD7 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pdlim7Q3TJD7 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pdlim7Q3TJD7 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pdlim7Q3TJD7 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC16.75■□□□□ 0.27
Pdlim7Q3TJD7 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pdlim7Q3TJD7 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pdlim7Q3TJD7 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pdlim7Q3TJD7 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pdlim7Q3TJD7 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pdlim7Q3TJD7 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pdlim7Q3TJD7 Gm9115-201ENSMUST00000120192 1348 ntBASIC16.74■□□□□ 0.27
Pdlim7Q3TJD7 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pdlim7Q3TJD7 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pdlim7Q3TJD7 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pdlim7Q3TJD7 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pdlim7Q3TJD7 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pdlim7Q3TJD7 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pdlim7Q3TJD7 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pdlim7Q3TJD7 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC16.74■□□□□ 0.27
Pdlim7Q3TJD7 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC16.74■□□□□ 0.27
Pdlim7Q3TJD7 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pdlim7Q3TJD7 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC16.74■□□□□ 0.27
Pdlim7Q3TJD7 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC16.74■□□□□ 0.27
Pdlim7Q3TJD7 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pdlim7Q3TJD7 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC16.74■□□□□ 0.27
Pdlim7Q3TJD7 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pdlim7Q3TJD7 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pdlim7Q3TJD7 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pdlim7Q3TJD7 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pdlim7Q3TJD7 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pdlim7Q3TJD7 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC16.73■□□□□ 0.27
Pdlim7Q3TJD7 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pdlim7Q3TJD7 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Pdlim7Q3TJD7 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Pdlim7Q3TJD7 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pdlim7Q3TJD7 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Pdlim7Q3TJD7 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pdlim7Q3TJD7 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pdlim7Q3TJD7 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pdlim7Q3TJD7 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pdlim7Q3TJD7 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pdlim7Q3TJD7 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Pdlim7Q3TJD7 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pdlim7Q3TJD7 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pdlim7Q3TJD7 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pdlim7Q3TJD7 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC16.73■□□□□ 0.27
Pdlim7Q3TJD7 Gm45668-201ENSMUST00000211271 493 ntBASIC16.73■□□□□ 0.27
Pdlim7Q3TJD7 Gm16011-201ENSMUST00000121567 2662 ntBASIC16.73■□□□□ 0.27
Pdlim7Q3TJD7 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Pdlim7Q3TJD7 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pdlim7Q3TJD7 Gm6756-201ENSMUST00000180647 1620 ntBASIC16.73■□□□□ 0.27
Pdlim7Q3TJD7 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pdlim7Q3TJD7 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pdlim7Q3TJD7 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pdlim7Q3TJD7 AC164565.1-201ENSMUST00000217520 1484 ntBASIC16.73■□□□□ 0.27
Pdlim7Q3TJD7 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pdlim7Q3TJD7 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pdlim7Q3TJD7 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pdlim7Q3TJD7 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pdlim7Q3TJD7 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.72■□□□□ 0.27
Pdlim7Q3TJD7 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pdlim7Q3TJD7 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pdlim7Q3TJD7 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Pdlim7Q3TJD7 Gm13829-201ENSMUST00000119600 138 ntBASIC16.72■□□□□ 0.27
Pdlim7Q3TJD7 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Pdlim7Q3TJD7 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pdlim7Q3TJD7 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pdlim7Q3TJD7 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pdlim7Q3TJD7 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pdlim7Q3TJD7 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pdlim7Q3TJD7 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
Pdlim7Q3TJD7 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pdlim7Q3TJD7 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pdlim7Q3TJD7 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pdlim7Q3TJD7 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pdlim7Q3TJD7 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pdlim7Q3TJD7 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC16.71■□□□□ 0.27
Pdlim7Q3TJD7 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pdlim7Q3TJD7 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms