Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cul4aQ3TCH7 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cul4aQ3TCH7 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cul4aQ3TCH7 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cul4aQ3TCH7 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Cul4aQ3TCH7 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC15.78■□□□□ 0.12
Cul4aQ3TCH7 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cul4aQ3TCH7 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Cul4aQ3TCH7 Gm43205-201ENSMUST00000198622 1968 ntBASIC15.78■□□□□ 0.12
Cul4aQ3TCH7 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cul4aQ3TCH7 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Cul4aQ3TCH7 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cul4aQ3TCH7 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Cul4aQ3TCH7 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cul4aQ3TCH7 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cul4aQ3TCH7 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cul4aQ3TCH7 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cul4aQ3TCH7 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Cul4aQ3TCH7 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cul4aQ3TCH7 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cul4aQ3TCH7 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cul4aQ3TCH7 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cul4aQ3TCH7 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cul4aQ3TCH7 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC15.78■□□□□ 0.12
Cul4aQ3TCH7 AC158538.1-201ENSMUST00000225870 294 ntBASIC15.78■□□□□ 0.12
Cul4aQ3TCH7 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cul4aQ3TCH7 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Cul4aQ3TCH7 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cul4aQ3TCH7 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cul4aQ3TCH7 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Cul4aQ3TCH7 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cul4aQ3TCH7 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC15.78■□□□□ 0.12
Cul4aQ3TCH7 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cul4aQ3TCH7 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Cul4aQ3TCH7 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Cul4aQ3TCH7 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Cul4aQ3TCH7 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cul4aQ3TCH7 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC15.78■□□□□ 0.12
Cul4aQ3TCH7 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cul4aQ3TCH7 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cul4aQ3TCH7 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Cul4aQ3TCH7 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Cul4aQ3TCH7 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cul4aQ3TCH7 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Cul4aQ3TCH7 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cul4aQ3TCH7 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
Cul4aQ3TCH7 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cul4aQ3TCH7 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Cul4aQ3TCH7 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cul4aQ3TCH7 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC15.77■□□□□ 0.12
Cul4aQ3TCH7 Gm44357-201ENSMUST00000195897 142 ntBASIC15.77■□□□□ 0.12
Cul4aQ3TCH7 Gm19658-201ENSMUST00000196231 138 ntBASIC15.77■□□□□ 0.12
Cul4aQ3TCH7 Gm44367-201ENSMUST00000196836 138 ntBASIC15.77■□□□□ 0.12
Cul4aQ3TCH7 Gm44350-201ENSMUST00000197197 138 ntBASIC15.77■□□□□ 0.12
Cul4aQ3TCH7 Gm44390-201ENSMUST00000197533 144 ntBASIC15.77■□□□□ 0.12
Cul4aQ3TCH7 Gm44313-201ENSMUST00000198018 138 ntBASIC15.77■□□□□ 0.12
Cul4aQ3TCH7 Gm44486-201ENSMUST00000198508 138 ntBASIC15.77■□□□□ 0.12
Cul4aQ3TCH7 Gm44314-201ENSMUST00000199263 138 ntBASIC15.77■□□□□ 0.12
Cul4aQ3TCH7 Gm44394-201ENSMUST00000199558 138 ntBASIC15.77■□□□□ 0.12
Cul4aQ3TCH7 Gm44484-201ENSMUST00000199873 138 ntBASIC15.77■□□□□ 0.12
Cul4aQ3TCH7 Gm44466-201ENSMUST00000200264 138 ntBASIC15.77■□□□□ 0.12
Cul4aQ3TCH7 Gm44359-201ENSMUST00000200671 138 ntBASIC15.77■□□□□ 0.12
Cul4aQ3TCH7 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC15.77■□□□□ 0.12
Cul4aQ3TCH7 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cul4aQ3TCH7 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Cul4aQ3TCH7 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
Cul4aQ3TCH7 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cul4aQ3TCH7 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
Cul4aQ3TCH7 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cul4aQ3TCH7 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Cul4aQ3TCH7 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
Cul4aQ3TCH7 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Cul4aQ3TCH7 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cul4aQ3TCH7 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cul4aQ3TCH7 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cul4aQ3TCH7 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Cul4aQ3TCH7 Gm13418-201ENSMUST00000119097 944 ntBASIC15.76■□□□□ 0.11
Cul4aQ3TCH7 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cul4aQ3TCH7 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC15.76■□□□□ 0.11
Cul4aQ3TCH7 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Cul4aQ3TCH7 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Cul4aQ3TCH7 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
Cul4aQ3TCH7 Gm5682-201ENSMUST00000173402 505 ntBASIC15.76■□□□□ 0.11
Cul4aQ3TCH7 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cul4aQ3TCH7 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cul4aQ3TCH7 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cul4aQ3TCH7 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Cul4aQ3TCH7 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cul4aQ3TCH7 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cul4aQ3TCH7 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cul4aQ3TCH7 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cul4aQ3TCH7 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cul4aQ3TCH7 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cul4aQ3TCH7 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cul4aQ3TCH7 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cul4aQ3TCH7 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Cul4aQ3TCH7 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Cul4aQ3TCH7 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Cul4aQ3TCH7 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Cul4aQ3TCH7 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms