Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
Nhej1Q3KNJ2 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nhej1Q3KNJ2 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC16.03■□□□□ 0.16
Nhej1Q3KNJ2 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nhej1Q3KNJ2 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Nhej1Q3KNJ2 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nhej1Q3KNJ2 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nhej1Q3KNJ2 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Nhej1Q3KNJ2 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nhej1Q3KNJ2 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nhej1Q3KNJ2 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Nhej1Q3KNJ2 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Nhej1Q3KNJ2 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nhej1Q3KNJ2 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nhej1Q3KNJ2 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nhej1Q3KNJ2 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC16.02■□□□□ 0.16
Nhej1Q3KNJ2 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Nhej1Q3KNJ2 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nhej1Q3KNJ2 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Nhej1Q3KNJ2 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nhej1Q3KNJ2 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nhej1Q3KNJ2 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nhej1Q3KNJ2 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nhej1Q3KNJ2 Mir7071-201ENSMUST00000184847 69 ntBASIC16.02■□□□□ 0.16
Nhej1Q3KNJ2 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nhej1Q3KNJ2 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC16.02■□□□□ 0.16
Nhej1Q3KNJ2 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nhej1Q3KNJ2 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nhej1Q3KNJ2 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nhej1Q3KNJ2 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nhej1Q3KNJ2 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nhej1Q3KNJ2 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Nhej1Q3KNJ2 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
Nhej1Q3KNJ2 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Nhej1Q3KNJ2 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Nhej1Q3KNJ2 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Nhej1Q3KNJ2 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Nhej1Q3KNJ2 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Nhej1Q3KNJ2 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Nhej1Q3KNJ2 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Nhej1Q3KNJ2 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Nhej1Q3KNJ2 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Nhej1Q3KNJ2 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
Nhej1Q3KNJ2 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nhej1Q3KNJ2 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Nhej1Q3KNJ2 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Nhej1Q3KNJ2 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC16.01■□□□□ 0.15
Nhej1Q3KNJ2 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nhej1Q3KNJ2 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nhej1Q3KNJ2 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Nhej1Q3KNJ2 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nhej1Q3KNJ2 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nhej1Q3KNJ2 Gm12644-201ENSMUST00000119935 606 ntBASIC16.01■□□□□ 0.15
Nhej1Q3KNJ2 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nhej1Q3KNJ2 Gm10499-201ENSMUST00000174094 934 ntBASIC16.01■□□□□ 0.15
Nhej1Q3KNJ2 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Nhej1Q3KNJ2 Gm33142-201ENSMUST00000193913 867 ntBASIC16.01■□□□□ 0.15
Nhej1Q3KNJ2 Rbfox2-207ENSMUST00000227533 1041 ntBASIC16.01■□□□□ 0.15
Nhej1Q3KNJ2 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nhej1Q3KNJ2 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC16.01■□□□□ 0.15
Nhej1Q3KNJ2 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Nhej1Q3KNJ2 Gm10313-201ENSMUST00000095320 1002 ntBASIC16.01■□□□□ 0.15
Nhej1Q3KNJ2 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nhej1Q3KNJ2 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nhej1Q3KNJ2 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nhej1Q3KNJ2 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nhej1Q3KNJ2 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Nhej1Q3KNJ2 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nhej1Q3KNJ2 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nhej1Q3KNJ2 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Nhej1Q3KNJ2 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Nhej1Q3KNJ2 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Nhej1Q3KNJ2 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nhej1Q3KNJ2 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Nhej1Q3KNJ2 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
Nhej1Q3KNJ2 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nhej1Q3KNJ2 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Nhej1Q3KNJ2 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Nhej1Q3KNJ2 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nhej1Q3KNJ2 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nhej1Q3KNJ2 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nhej1Q3KNJ2 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC16■□□□□ 0.15
Nhej1Q3KNJ2 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Nhej1Q3KNJ2 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nhej1Q3KNJ2 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Nhej1Q3KNJ2 Gm21009-201ENSMUST00000197169 1669 ntBASIC16■□□□□ 0.15
Nhej1Q3KNJ2 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Nhej1Q3KNJ2 Gm11453-201ENSMUST00000117318 1007 ntBASIC16■□□□□ 0.15
Nhej1Q3KNJ2 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nhej1Q3KNJ2 Gm27646-201ENSMUST00000183989 110 ntBASIC16■□□□□ 0.15
Nhej1Q3KNJ2 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC16■□□□□ 0.15
Nhej1Q3KNJ2 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Nhej1Q3KNJ2 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Nhej1Q3KNJ2 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nhej1Q3KNJ2 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC16■□□□□ 0.15
Nhej1Q3KNJ2 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nhej1Q3KNJ2 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Nhej1Q3KNJ2 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nhej1Q3KNJ2 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Nhej1Q3KNJ2 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms