Protein–RNA interactions for Protein: Q2MKA5

Chrna5, Neuronal acetylcholine receptor subunit alpha-5, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna5Q2MKA5 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chrna5Q2MKA5 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chrna5Q2MKA5 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chrna5Q2MKA5 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chrna5Q2MKA5 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chrna5Q2MKA5 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Chrna5Q2MKA5 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Chrna5Q2MKA5 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Chrna5Q2MKA5 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Chrna5Q2MKA5 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chrna5Q2MKA5 Gm27631-201ENSMUST00000184163 466 ntBASIC17.76■□□□□ 0.43
Chrna5Q2MKA5 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chrna5Q2MKA5 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chrna5Q2MKA5 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chrna5Q2MKA5 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC17.76■□□□□ 0.43
Chrna5Q2MKA5 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chrna5Q2MKA5 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Chrna5Q2MKA5 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chrna5Q2MKA5 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC17.75■□□□□ 0.43
Chrna5Q2MKA5 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chrna5Q2MKA5 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chrna5Q2MKA5 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Chrna5Q2MKA5 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chrna5Q2MKA5 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Chrna5Q2MKA5 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Chrna5Q2MKA5 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Chrna5Q2MKA5 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chrna5Q2MKA5 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chrna5Q2MKA5 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC17.75■□□□□ 0.43
Chrna5Q2MKA5 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC17.75■□□□□ 0.43
Chrna5Q2MKA5 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC17.75■□□□□ 0.43
Chrna5Q2MKA5 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Chrna5Q2MKA5 Mir7085-201ENSMUST00000184353 66 ntBASIC17.75■□□□□ 0.43
Chrna5Q2MKA5 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC17.75■□□□□ 0.43
Chrna5Q2MKA5 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC17.75■□□□□ 0.43
Chrna5Q2MKA5 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chrna5Q2MKA5 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chrna5Q2MKA5 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chrna5Q2MKA5 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Chrna5Q2MKA5 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Chrna5Q2MKA5 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chrna5Q2MKA5 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Chrna5Q2MKA5 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chrna5Q2MKA5 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chrna5Q2MKA5 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chrna5Q2MKA5 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Chrna5Q2MKA5 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chrna5Q2MKA5 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Chrna5Q2MKA5 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chrna5Q2MKA5 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chrna5Q2MKA5 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chrna5Q2MKA5 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Chrna5Q2MKA5 Gm6222-201ENSMUST00000120787 396 ntBASIC17.74■□□□□ 0.43
Chrna5Q2MKA5 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Chrna5Q2MKA5 Gm28631-201ENSMUST00000190740 334 ntBASIC17.74■□□□□ 0.43
Chrna5Q2MKA5 Gm18018-201ENSMUST00000198273 408 ntBASIC17.74■□□□□ 0.43
Chrna5Q2MKA5 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC17.74■□□□□ 0.43
Chrna5Q2MKA5 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chrna5Q2MKA5 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chrna5Q2MKA5 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chrna5Q2MKA5 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chrna5Q2MKA5 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chrna5Q2MKA5 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chrna5Q2MKA5 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC17.73■□□□□ 0.43
Chrna5Q2MKA5 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.73■□□□□ 0.43
Chrna5Q2MKA5 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Chrna5Q2MKA5 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chrna5Q2MKA5 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chrna5Q2MKA5 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Chrna5Q2MKA5 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC17.73■□□□□ 0.43
Chrna5Q2MKA5 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Chrna5Q2MKA5 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chrna5Q2MKA5 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chrna5Q2MKA5 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chrna5Q2MKA5 Gm11478-201ENSMUST00000117851 599 ntBASIC17.73■□□□□ 0.43
Chrna5Q2MKA5 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chrna5Q2MKA5 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Chrna5Q2MKA5 Gm8602-201ENSMUST00000184045 607 ntBASIC17.73■□□□□ 0.43
Chrna5Q2MKA5 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chrna5Q2MKA5 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Chrna5Q2MKA5 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chrna5Q2MKA5 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chrna5Q2MKA5 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chrna5Q2MKA5 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Chrna5Q2MKA5 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Chrna5Q2MKA5 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Chrna5Q2MKA5 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC17.72■□□□□ 0.43
Chrna5Q2MKA5 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chrna5Q2MKA5 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC17.72■□□□□ 0.43
Chrna5Q2MKA5 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC17.72■□□□□ 0.43
Chrna5Q2MKA5 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Chrna5Q2MKA5 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chrna5Q2MKA5 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Chrna5Q2MKA5 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Chrna5Q2MKA5 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chrna5Q2MKA5 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Chrna5Q2MKA5 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC17.72■□□□□ 0.43
Chrna5Q2MKA5 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Chrna5Q2MKA5 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Chrna5Q2MKA5 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms