Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chd8Q09XV5 Gm10109-202ENSMUST00000206890 1211 ntBASIC13.31□□□□□ -0.28
Chd8Q09XV5 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chd8Q09XV5 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Chd8Q09XV5 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Chd8Q09XV5 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC13.31□□□□□ -0.28
Chd8Q09XV5 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Chd8Q09XV5 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Chd8Q09XV5 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chd8Q09XV5 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chd8Q09XV5 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Chd8Q09XV5 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Chd8Q09XV5 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chd8Q09XV5 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC13.3□□□□□ -0.28
Chd8Q09XV5 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Chd8Q09XV5 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chd8Q09XV5 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chd8Q09XV5 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chd8Q09XV5 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chd8Q09XV5 Zcchc6-207ENSMUST00000225576 2499 ntBASIC13.3□□□□□ -0.28
Chd8Q09XV5 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chd8Q09XV5 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Chd8Q09XV5 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Chd8Q09XV5 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Chd8Q09XV5 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Chd8Q09XV5 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC13.3□□□□□ -0.28
Chd8Q09XV5 CT025551.1-201ENSMUST00000223996 692 ntBASIC13.3□□□□□ -0.28
Chd8Q09XV5 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Chd8Q09XV5 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Chd8Q09XV5 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Chd8Q09XV5 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chd8Q09XV5 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Chd8Q09XV5 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Chd8Q09XV5 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chd8Q09XV5 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chd8Q09XV5 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Chd8Q09XV5 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Chd8Q09XV5 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Chd8Q09XV5 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC13.29□□□□□ -0.28
Chd8Q09XV5 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chd8Q09XV5 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chd8Q09XV5 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC13.29□□□□□ -0.28
Chd8Q09XV5 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Chd8Q09XV5 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chd8Q09XV5 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Chd8Q09XV5 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Chd8Q09XV5 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chd8Q09XV5 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Chd8Q09XV5 Gm17376-201ENSMUST00000166016 84 ntBASIC13.29□□□□□ -0.28
Chd8Q09XV5 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC13.29□□□□□ -0.28
Chd8Q09XV5 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC13.29□□□□□ -0.28
Chd8Q09XV5 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Chd8Q09XV5 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chd8Q09XV5 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chd8Q09XV5 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chd8Q09XV5 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Chd8Q09XV5 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chd8Q09XV5 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC13.29□□□□□ -0.28
Chd8Q09XV5 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chd8Q09XV5 Gm6222-201ENSMUST00000120787 396 ntBASIC13.28□□□□□ -0.28
Chd8Q09XV5 Gm24644-201ENSMUST00000157114 139 ntBASIC13.28□□□□□ -0.28
Chd8Q09XV5 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC13.28□□□□□ -0.28
Chd8Q09XV5 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chd8Q09XV5 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chd8Q09XV5 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chd8Q09XV5 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chd8Q09XV5 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chd8Q09XV5 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chd8Q09XV5 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chd8Q09XV5 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chd8Q09XV5 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chd8Q09XV5 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chd8Q09XV5 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chd8Q09XV5 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chd8Q09XV5 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chd8Q09XV5 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Chd8Q09XV5 Gm12241-201ENSMUST00000118330 726 ntBASIC13.28□□□□□ -0.28
Chd8Q09XV5 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Chd8Q09XV5 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chd8Q09XV5 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC13.28□□□□□ -0.28
Chd8Q09XV5 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chd8Q09XV5 AC133598.1-201ENSMUST00000224327 660 ntBASIC13.28□□□□□ -0.28
Chd8Q09XV5 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Chd8Q09XV5 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Chd8Q09XV5 Gm14452-201ENSMUST00000118680 1632 ntBASIC13.28□□□□□ -0.28
Chd8Q09XV5 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chd8Q09XV5 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Chd8Q09XV5 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chd8Q09XV5 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC13.28□□□□□ -0.28
Chd8Q09XV5 Gm12846-201ENSMUST00000120431 1373 ntBASIC13.28□□□□□ -0.28
Chd8Q09XV5 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Chd8Q09XV5 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chd8Q09XV5 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Chd8Q09XV5 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chd8Q09XV5 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Chd8Q09XV5 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Chd8Q09XV5 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC13.27□□□□□ -0.28
Chd8Q09XV5 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC13.27□□□□□ -0.28
Chd8Q09XV5 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Chd8Q09XV5 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC13.27□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms