Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Gm27631-201ENSMUST00000184163 466 ntBASIC10.91□□□□□ -0.66
Hspg2Q05793 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC10.91□□□□□ -0.66
Hspg2Q05793 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hspg2Q05793 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Hspg2Q05793 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hspg2Q05793 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hspg2Q05793 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Hspg2Q05793 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hspg2Q05793 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hspg2Q05793 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hspg2Q05793 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Hspg2Q05793 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hspg2Q05793 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC10.9□□□□□ -0.66
Hspg2Q05793 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Hspg2Q05793 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC10.9□□□□□ -0.66
Hspg2Q05793 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC10.9□□□□□ -0.66
Hspg2Q05793 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hspg2Q05793 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hspg2Q05793 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC10.9□□□□□ -0.66
Hspg2Q05793 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC10.9□□□□□ -0.66
Hspg2Q05793 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Hspg2Q05793 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Hspg2Q05793 AC164565.1-201ENSMUST00000217520 1484 ntBASIC10.9□□□□□ -0.66
Hspg2Q05793 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC10.9□□□□□ -0.66
Hspg2Q05793 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC10.9□□□□□ -0.66
Hspg2Q05793 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Hspg2Q05793 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC10.9□□□□□ -0.66
Hspg2Q05793 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Hspg2Q05793 Gm10766-202ENSMUST00000194123 606 ntBASIC10.9□□□□□ -0.66
Hspg2Q05793 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hspg2Q05793 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hspg2Q05793 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Hspg2Q05793 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hspg2Q05793 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Hspg2Q05793 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
Hspg2Q05793 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Hspg2Q05793 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Hspg2Q05793 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
Hspg2Q05793 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Hspg2Q05793 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hspg2Q05793 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC10.89□□□□□ -0.67
Hspg2Q05793 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC10.89□□□□□ -0.67
Hspg2Q05793 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC10.89□□□□□ -0.67
Hspg2Q05793 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC10.89□□□□□ -0.67
Hspg2Q05793 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hspg2Q05793 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hspg2Q05793 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Hspg2Q05793 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hspg2Q05793 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC10.89□□□□□ -0.67
Hspg2Q05793 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hspg2Q05793 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hspg2Q05793 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Hspg2Q05793 Mir1982-201ENSMUST00000157368 74 ntBASIC10.89□□□□□ -0.67
Hspg2Q05793 AC154171.1-201ENSMUST00000224610 643 ntBASIC10.89□□□□□ -0.67
Hspg2Q05793 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC10.89□□□□□ -0.67
Hspg2Q05793 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Hspg2Q05793 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hspg2Q05793 Gm15236-201ENSMUST00000117309 379 ntBASIC10.89□□□□□ -0.67
Hspg2Q05793 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
Hspg2Q05793 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Hspg2Q05793 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Hspg2Q05793 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hspg2Q05793 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Hspg2Q05793 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC10.89□□□□□ -0.67
Hspg2Q05793 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hspg2Q05793 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hspg2Q05793 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC10.88□□□□□ -0.67
Hspg2Q05793 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Hspg2Q05793 CT010506.4-201ENSMUST00000225457 351 ntBASIC10.88□□□□□ -0.67
Hspg2Q05793 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hspg2Q05793 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
Hspg2Q05793 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Hspg2Q05793 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC10.88□□□□□ -0.67
Hspg2Q05793 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hspg2Q05793 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hspg2Q05793 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hspg2Q05793 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Hspg2Q05793 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Hspg2Q05793 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hspg2Q05793 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hspg2Q05793 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Hspg2Q05793 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hspg2Q05793 Gm37917-201ENSMUST00000194711 392 ntBASIC10.88□□□□□ -0.67
Hspg2Q05793 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC10.88□□□□□ -0.67
Hspg2Q05793 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Hspg2Q05793 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hspg2Q05793 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hspg2Q05793 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Hspg2Q05793 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hspg2Q05793 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hspg2Q05793 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hspg2Q05793 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hspg2Q05793 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hspg2Q05793 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Hspg2Q05793 Gm28760-201ENSMUST00000185995 736 ntBASIC10.88□□□□□ -0.67
Hspg2Q05793 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Hspg2Q05793 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Hspg2Q05793 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hspg2Q05793 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC10.88□□□□□ -0.67
Hspg2Q05793 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms