Protein–RNA interactions for Protein: Q02788

Col6a2, Collagen alpha-2(VI) chain, mousemouse

Predictions only

Length 1,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a2Q02788 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC14.98□□□□□ -0.01
Col6a2Q02788 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col6a2Q02788 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col6a2Q02788 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Col6a2Q02788 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Col6a2Q02788 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col6a2Q02788 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col6a2Q02788 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col6a2Q02788 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.98□□□□□ -0.01
Col6a2Q02788 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col6a2Q02788 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.98□□□□□ -0.01
Col6a2Q02788 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col6a2Q02788 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC14.98□□□□□ -0.01
Col6a2Q02788 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Col6a2Q02788 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col6a2Q02788 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col6a2Q02788 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Col6a2Q02788 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col6a2Q02788 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col6a2Q02788 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col6a2Q02788 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col6a2Q02788 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Col6a2Q02788 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.97□□□□□ -0.01
Col6a2Q02788 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col6a2Q02788 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC14.97□□□□□ -0.01
Col6a2Q02788 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.97□□□□□ -0.01
Col6a2Q02788 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col6a2Q02788 Gm44335-201ENSMUST00000196879 141 ntBASIC14.97□□□□□ -0.01
Col6a2Q02788 Gm44297-201ENSMUST00000198304 141 ntBASIC14.97□□□□□ -0.01
Col6a2Q02788 Gm44346-201ENSMUST00000198851 141 ntBASIC14.97□□□□□ -0.01
Col6a2Q02788 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC14.97□□□□□ -0.01
Col6a2Q02788 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col6a2Q02788 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col6a2Q02788 Gm44616-201ENSMUST00000206417 1732 ntBASIC14.97□□□□□ -0.01
Col6a2Q02788 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col6a2Q02788 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col6a2Q02788 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col6a2Q02788 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col6a2Q02788 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Col6a2Q02788 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col6a2Q02788 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col6a2Q02788 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col6a2Q02788 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
Col6a2Q02788 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Col6a2Q02788 Rprl2-201ENSMUST00000157150 290 ntBASIC14.96□□□□□ -0.01
Col6a2Q02788 Gm25925-201ENSMUST00000158314 306 ntBASIC14.96□□□□□ -0.01
Col6a2Q02788 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC14.96□□□□□ -0.01
Col6a2Q02788 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC14.96□□□□□ -0.01
Col6a2Q02788 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.96□□□□□ -0.01
Col6a2Q02788 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col6a2Q02788 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Col6a2Q02788 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col6a2Q02788 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col6a2Q02788 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col6a2Q02788 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col6a2Q02788 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col6a2Q02788 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col6a2Q02788 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Col6a2Q02788 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Col6a2Q02788 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
Col6a2Q02788 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col6a2Q02788 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col6a2Q02788 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col6a2Q02788 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.95□□□□□ -0.02
Col6a2Q02788 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC14.95□□□□□ -0.02
Col6a2Q02788 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col6a2Q02788 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Col6a2Q02788 Celf4-206ENSMUST00000224553 1729 ntBASIC14.95□□□□□ -0.02
Col6a2Q02788 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col6a2Q02788 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.95□□□□□ -0.02
Col6a2Q02788 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col6a2Q02788 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col6a2Q02788 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col6a2Q02788 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Col6a2Q02788 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC14.95□□□□□ -0.02
Col6a2Q02788 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC14.95□□□□□ -0.02
Col6a2Q02788 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Col6a2Q02788 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Col6a2Q02788 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC14.95□□□□□ -0.02
Col6a2Q02788 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
Col6a2Q02788 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.95□□□□□ -0.02
Col6a2Q02788 Gm5628-201ENSMUST00000222318 1049 ntBASIC14.95□□□□□ -0.02
Col6a2Q02788 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.95□□□□□ -0.02
Col6a2Q02788 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Col6a2Q02788 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Col6a2Q02788 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col6a2Q02788 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col6a2Q02788 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Col6a2Q02788 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col6a2Q02788 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col6a2Q02788 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Col6a2Q02788 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col6a2Q02788 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col6a2Q02788 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Col6a2Q02788 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col6a2Q02788 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Col6a2Q02788 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col6a2Q02788 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col6a2Q02788 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col6a2Q02788 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms