Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Col8a1Q00780 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Col8a1Q00780 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC12.79□□□□□ -0.36
Col8a1Q00780 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC12.79□□□□□ -0.36
Col8a1Q00780 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC12.79□□□□□ -0.36
Col8a1Q00780 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC12.79□□□□□ -0.36
Col8a1Q00780 AC149294.4-201ENSMUST00000227870 882 ntBASIC12.79□□□□□ -0.36
Col8a1Q00780 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Col8a1Q00780 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Col8a1Q00780 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Col8a1Q00780 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC12.79□□□□□ -0.36
Col8a1Q00780 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col8a1Q00780 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Col8a1Q00780 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Col8a1Q00780 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col8a1Q00780 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Col8a1Q00780 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col8a1Q00780 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Col8a1Q00780 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col8a1Q00780 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col8a1Q00780 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC12.79□□□□□ -0.36
Col8a1Q00780 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC12.79□□□□□ -0.36
Col8a1Q00780 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Col8a1Q00780 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Col8a1Q00780 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Col8a1Q00780 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col8a1Q00780 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Col8a1Q00780 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col8a1Q00780 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col8a1Q00780 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC12.78□□□□□ -0.36
Col8a1Q00780 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Col8a1Q00780 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col8a1Q00780 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col8a1Q00780 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC12.78□□□□□ -0.36
Col8a1Q00780 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col8a1Q00780 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col8a1Q00780 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col8a1Q00780 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Col8a1Q00780 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col8a1Q00780 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC12.78□□□□□ -0.36
Col8a1Q00780 Gm29541-201ENSMUST00000191351 678 ntBASIC12.78□□□□□ -0.36
Col8a1Q00780 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Col8a1Q00780 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Col8a1Q00780 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col8a1Q00780 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col8a1Q00780 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Col8a1Q00780 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Col8a1Q00780 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col8a1Q00780 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC12.78□□□□□ -0.36
Col8a1Q00780 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col8a1Q00780 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col8a1Q00780 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Col8a1Q00780 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Col8a1Q00780 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col8a1Q00780 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col8a1Q00780 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC12.78□□□□□ -0.36
Col8a1Q00780 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col8a1Q00780 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col8a1Q00780 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col8a1Q00780 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Col8a1Q00780 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Col8a1Q00780 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Col8a1Q00780 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Col8a1Q00780 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Col8a1Q00780 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.36
Col8a1Q00780 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Col8a1Q00780 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.36
Col8a1Q00780 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Col8a1Q00780 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Col8a1Q00780 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Col8a1Q00780 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Col8a1Q00780 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col8a1Q00780 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Col8a1Q00780 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col8a1Q00780 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC12.77□□□□□ -0.37
Col8a1Q00780 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col8a1Q00780 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC12.77□□□□□ -0.37
Col8a1Q00780 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC12.77□□□□□ -0.37
Col8a1Q00780 Gm6007-201ENSMUST00000208170 823 ntBASIC12.77□□□□□ -0.37
Col8a1Q00780 Gm45384-201ENSMUST00000210451 277 ntBASIC12.77□□□□□ -0.37
Col8a1Q00780 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col8a1Q00780 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col8a1Q00780 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Col8a1Q00780 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col8a1Q00780 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col8a1Q00780 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col8a1Q00780 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col8a1Q00780 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col8a1Q00780 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col8a1Q00780 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Col8a1Q00780 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Col8a1Q00780 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Col8a1Q00780 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col8a1Q00780 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Col8a1Q00780 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col8a1Q00780 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col8a1Q00780 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Col8a1Q00780 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Col8a1Q00780 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col8a1Q00780 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms