Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC12.62□□□□□ -0.39
Npas1P97459 Gm45058-201ENSMUST00000205810 766 ntBASIC12.62□□□□□ -0.39
Npas1P97459 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC12.62□□□□□ -0.39
Npas1P97459 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC12.62□□□□□ -0.39
Npas1P97459 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Npas1P97459 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Npas1P97459 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC12.62□□□□□ -0.39
Npas1P97459 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC12.62□□□□□ -0.39
Npas1P97459 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.62□□□□□ -0.39
Npas1P97459 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC12.62□□□□□ -0.39
Npas1P97459 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Npas1P97459 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Npas1P97459 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Npas1P97459 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Npas1P97459 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Npas1P97459 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Npas1P97459 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Npas1P97459 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Npas1P97459 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Npas1P97459 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Npas1P97459 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Npas1P97459 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Npas1P97459 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Npas1P97459 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Npas1P97459 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC12.61□□□□□ -0.39
Npas1P97459 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC12.61□□□□□ -0.39
Npas1P97459 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Npas1P97459 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Npas1P97459 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Npas1P97459 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Npas1P97459 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Npas1P97459 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Npas1P97459 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Npas1P97459 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Npas1P97459 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Npas1P97459 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Npas1P97459 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC12.61□□□□□ -0.39
Npas1P97459 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Npas1P97459 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Npas1P97459 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Npas1P97459 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Npas1P97459 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Npas1P97459 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Npas1P97459 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Npas1P97459 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Npas1P97459 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Npas1P97459 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Npas1P97459 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Npas1P97459 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
Npas1P97459 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Npas1P97459 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Npas1P97459 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC12.6□□□□□ -0.39
Npas1P97459 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Npas1P97459 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Npas1P97459 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Npas1P97459 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Npas1P97459 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC12.6□□□□□ -0.39
Npas1P97459 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC12.6□□□□□ -0.39
Npas1P97459 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Npas1P97459 Mir6404-201ENSMUST00000183699 94 ntBASIC12.6□□□□□ -0.39
Npas1P97459 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC12.6□□□□□ -0.39
Npas1P97459 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC12.6□□□□□ -0.39
Npas1P97459 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Npas1P97459 Gm18959-201ENSMUST00000208954 655 ntBASIC12.6□□□□□ -0.39
Npas1P97459 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC12.6□□□□□ -0.39
Npas1P97459 Gm21559-201ENSMUST00000220638 855 ntBASIC12.6□□□□□ -0.39
Npas1P97459 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Npas1P97459 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Npas1P97459 Gm8587-201ENSMUST00000076538 843 ntBASIC12.6□□□□□ -0.39
Npas1P97459 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Npas1P97459 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Npas1P97459 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Npas1P97459 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Npas1P97459 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Npas1P97459 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Npas1P97459 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Npas1P97459 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Npas1P97459 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC12.6□□□□□ -0.39
Npas1P97459 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Npas1P97459 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Npas1P97459 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Npas1P97459 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Npas1P97459 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Npas1P97459 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Npas1P97459 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Npas1P97459 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Npas1P97459 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Npas1P97459 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
Npas1P97459 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Npas1P97459 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC12.59□□□□□ -0.39
Npas1P97459 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Npas1P97459 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Npas1P97459 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Npas1P97459 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC12.59□□□□□ -0.39
Npas1P97459 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Npas1P97459 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Npas1P97459 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
Npas1P97459 Gm6257-201ENSMUST00000163864 910 ntBASIC12.59□□□□□ -0.39
Npas1P97459 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Npas1P97459 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms