Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC16.31■□□□□ 0.2
Trim43cP86449 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim43cP86449 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Trim43cP86449 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC16.31■□□□□ 0.2
Trim43cP86449 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC16.31■□□□□ 0.2
Trim43cP86449 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Trim43cP86449 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim43cP86449 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim43cP86449 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim43cP86449 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim43cP86449 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim43cP86449 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim43cP86449 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim43cP86449 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim43cP86449 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim43cP86449 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim43cP86449 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim43cP86449 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim43cP86449 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim43cP86449 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Trim43cP86449 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trim43cP86449 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trim43cP86449 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim43cP86449 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trim43cP86449 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim43cP86449 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim43cP86449 Carlr-201ENSMUST00000181515 2574 ntBASIC16.3■□□□□ 0.2
Trim43cP86449 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trim43cP86449 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim43cP86449 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim43cP86449 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Trim43cP86449 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim43cP86449 Gm7229-201ENSMUST00000214719 1007 ntBASIC16.3■□□□□ 0.2
Trim43cP86449 CT010506.4-201ENSMUST00000225457 351 ntBASIC16.3■□□□□ 0.2
Trim43cP86449 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim43cP86449 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim43cP86449 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim43cP86449 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim43cP86449 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trim43cP86449 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Trim43cP86449 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim43cP86449 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim43cP86449 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim43cP86449 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim43cP86449 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim43cP86449 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Trim43cP86449 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC16.29■□□□□ 0.2
Trim43cP86449 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC16.29■□□□□ 0.2
Trim43cP86449 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim43cP86449 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim43cP86449 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC16.29■□□□□ 0.2
Trim43cP86449 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC16.29■□□□□ 0.2
Trim43cP86449 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim43cP86449 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC16.29■□□□□ 0.2
Trim43cP86449 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC16.29■□□□□ 0.2
Trim43cP86449 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC16.29■□□□□ 0.2
Trim43cP86449 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim43cP86449 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim43cP86449 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim43cP86449 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim43cP86449 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim43cP86449 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Trim43cP86449 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim43cP86449 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Trim43cP86449 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim43cP86449 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim43cP86449 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC16.28■□□□□ 0.2
Trim43cP86449 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim43cP86449 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Trim43cP86449 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim43cP86449 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim43cP86449 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC16.28■□□□□ 0.2
Trim43cP86449 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim43cP86449 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim43cP86449 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Trim43cP86449 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim43cP86449 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim43cP86449 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim43cP86449 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim43cP86449 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim43cP86449 Gm44771-201ENSMUST00000206975 626 ntBASIC16.28■□□□□ 0.2
Trim43cP86449 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim43cP86449 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim43cP86449 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim43cP86449 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim43cP86449 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim43cP86449 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim43cP86449 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC16.28■□□□□ 0.2
Trim43cP86449 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim43cP86449 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim43cP86449 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim43cP86449 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim43cP86449 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim43cP86449 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim43cP86449 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim43cP86449 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
Trim43cP86449 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim43cP86449 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim43cP86449 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim43cP86449 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms