Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SgcbP82349 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SgcbP82349 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
SgcbP82349 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SgcbP82349 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SgcbP82349 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC13.38□□□□□ -0.27
SgcbP82349 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SgcbP82349 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SgcbP82349 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SgcbP82349 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SgcbP82349 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
SgcbP82349 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SgcbP82349 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
SgcbP82349 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC13.38□□□□□ -0.27
SgcbP82349 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC13.38□□□□□ -0.27
SgcbP82349 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC13.38□□□□□ -0.27
SgcbP82349 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC13.38□□□□□ -0.27
SgcbP82349 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC13.38□□□□□ -0.27
SgcbP82349 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SgcbP82349 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SgcbP82349 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC13.38□□□□□ -0.27
SgcbP82349 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SgcbP82349 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
SgcbP82349 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
SgcbP82349 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SgcbP82349 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
SgcbP82349 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SgcbP82349 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SgcbP82349 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SgcbP82349 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SgcbP82349 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SgcbP82349 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SgcbP82349 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
SgcbP82349 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SgcbP82349 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
SgcbP82349 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
SgcbP82349 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SgcbP82349 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC13.37□□□□□ -0.27
SgcbP82349 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SgcbP82349 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC13.37□□□□□ -0.27
SgcbP82349 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SgcbP82349 AC154572.2-201ENSMUST00000225105 997 ntBASIC13.37□□□□□ -0.27
SgcbP82349 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SgcbP82349 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SgcbP82349 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC13.37□□□□□ -0.27
SgcbP82349 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
SgcbP82349 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
SgcbP82349 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SgcbP82349 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
SgcbP82349 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
SgcbP82349 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
SgcbP82349 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SgcbP82349 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SgcbP82349 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
SgcbP82349 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SgcbP82349 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
SgcbP82349 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SgcbP82349 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SgcbP82349 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SgcbP82349 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SgcbP82349 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SgcbP82349 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SgcbP82349 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
SgcbP82349 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SgcbP82349 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SgcbP82349 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SgcbP82349 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SgcbP82349 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SgcbP82349 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SgcbP82349 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SgcbP82349 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SgcbP82349 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SgcbP82349 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
SgcbP82349 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SgcbP82349 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
SgcbP82349 Gm13597-201ENSMUST00000121239 375 ntBASIC13.36□□□□□ -0.27
SgcbP82349 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC13.36□□□□□ -0.27
SgcbP82349 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
SgcbP82349 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC13.36□□□□□ -0.27
SgcbP82349 Gm44492-201ENSMUST00000197012 141 ntBASIC13.36□□□□□ -0.27
SgcbP82349 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SgcbP82349 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SgcbP82349 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SgcbP82349 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
SgcbP82349 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SgcbP82349 AC130669.1-201ENSMUST00000228537 1672 ntBASIC13.36□□□□□ -0.27
SgcbP82349 Gm8242-201ENSMUST00000193029 1420 ntBASIC13.36□□□□□ -0.27
SgcbP82349 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SgcbP82349 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SgcbP82349 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
SgcbP82349 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SgcbP82349 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC13.36□□□□□ -0.27
SgcbP82349 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
SgcbP82349 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SgcbP82349 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SgcbP82349 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SgcbP82349 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SgcbP82349 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
SgcbP82349 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.35□□□□□ -0.27
SgcbP82349 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms