Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Shox2P70390 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Shox2P70390 Gm38094-201ENSMUST00000195864 2978 ntBASIC14.85□□□□□ -0.03
Shox2P70390 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Shox2P70390 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Shox2P70390 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC14.85□□□□□ -0.03
Shox2P70390 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Shox2P70390 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Shox2P70390 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Shox2P70390 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Shox2P70390 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Shox2P70390 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Shox2P70390 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Shox2P70390 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Shox2P70390 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Shox2P70390 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Shox2P70390 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Shox2P70390 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC14.84□□□□□ -0.03
Shox2P70390 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC14.84□□□□□ -0.03
Shox2P70390 Gm1818-201ENSMUST00000169406 1184 ntBASIC14.84□□□□□ -0.03
Shox2P70390 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC14.84□□□□□ -0.03
Shox2P70390 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Shox2P70390 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Shox2P70390 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Shox2P70390 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Shox2P70390 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Shox2P70390 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
Shox2P70390 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Shox2P70390 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Shox2P70390 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC14.84□□□□□ -0.03
Shox2P70390 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC14.84□□□□□ -0.03
Shox2P70390 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Shox2P70390 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.83□□□□□ -0.03
Shox2P70390 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Shox2P70390 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Shox2P70390 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Shox2P70390 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Shox2P70390 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Shox2P70390 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Shox2P70390 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Shox2P70390 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC14.83□□□□□ -0.04
Shox2P70390 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Shox2P70390 Gm4609-201ENSMUST00000106443 1002 ntBASIC14.83□□□□□ -0.04
Shox2P70390 Gm5138-201ENSMUST00000113842 1002 ntBASIC14.83□□□□□ -0.04
Shox2P70390 Gm15191-201ENSMUST00000117933 1000 ntBASIC14.83□□□□□ -0.04
Shox2P70390 Gm12182-201ENSMUST00000118655 1008 ntBASIC14.83□□□□□ -0.04
Shox2P70390 Gm13882-201ENSMUST00000120886 1002 ntBASIC14.83□□□□□ -0.04
Shox2P70390 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Shox2P70390 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.83□□□□□ -0.04
Shox2P70390 Gm10284-201ENSMUST00000145057 1005 ntBASIC14.83□□□□□ -0.04
Shox2P70390 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC14.83□□□□□ -0.04
Shox2P70390 Gm10481-201ENSMUST00000179228 1002 ntBASIC14.83□□□□□ -0.04
Shox2P70390 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC14.83□□□□□ -0.04
Shox2P70390 Gm2574-201ENSMUST00000181051 1002 ntBASIC14.83□□□□□ -0.04
Shox2P70390 Gm3200-201ENSMUST00000181493 1002 ntBASIC14.83□□□□□ -0.04
Shox2P70390 Gm8825-201ENSMUST00000182565 998 ntBASIC14.83□□□□□ -0.04
Shox2P70390 Gm4518-201ENSMUST00000182638 718 ntBASIC14.83□□□□□ -0.04
Shox2P70390 Gm8330-201ENSMUST00000182754 1008 ntBASIC14.83□□□□□ -0.04
Shox2P70390 Gm4575-201ENSMUST00000182991 1002 ntBASIC14.83□□□□□ -0.04
Shox2P70390 Gm8709-201ENSMUST00000183230 1012 ntBASIC14.83□□□□□ -0.04
Shox2P70390 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC14.83□□□□□ -0.04
Shox2P70390 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC14.83□□□□□ -0.04
Shox2P70390 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC14.83□□□□□ -0.04
Shox2P70390 Gm19164-201ENSMUST00000210667 640 ntBASIC14.83□□□□□ -0.04
Shox2P70390 AC130713.1-201ENSMUST00000228853 1096 ntBASIC14.83□□□□□ -0.04
Shox2P70390 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Shox2P70390 Gm10293-201ENSMUST00000076317 1002 ntBASIC14.83□□□□□ -0.04
Shox2P70390 Gm6316-201ENSMUST00000082064 1020 ntBASIC14.83□□□□□ -0.04
Shox2P70390 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Shox2P70390 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Shox2P70390 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Shox2P70390 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC14.83□□□□□ -0.04
Shox2P70390 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Shox2P70390 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.83□□□□□ -0.04
Shox2P70390 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC14.83□□□□□ -0.04
Shox2P70390 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Shox2P70390 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Shox2P70390 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Shox2P70390 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Shox2P70390 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Shox2P70390 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Shox2P70390 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Shox2P70390 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Shox2P70390 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Shox2P70390 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Shox2P70390 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Shox2P70390 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Shox2P70390 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Shox2P70390 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Shox2P70390 Mir5122-201ENSMUST00000175004 89 ntBASIC14.82□□□□□ -0.04
Shox2P70390 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC14.82□□□□□ -0.04
Shox2P70390 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC14.82□□□□□ -0.04
Shox2P70390 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC14.82□□□□□ -0.04
Shox2P70390 Gm18101-201ENSMUST00000215769 548 ntBASIC14.82□□□□□ -0.04
Shox2P70390 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.82□□□□□ -0.04
Shox2P70390 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Shox2P70390 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Shox2P70390 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Shox2P70390 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Shox2P70390 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms