Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 Gm27397-201ENSMUST00000184997 107 ntBASIC15.22■□□□□ 0.03
ThraP63058 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC15.22■□□□□ 0.03
ThraP63058 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ThraP63058 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ThraP63058 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ThraP63058 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ThraP63058 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
ThraP63058 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
ThraP63058 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
ThraP63058 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ThraP63058 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
ThraP63058 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ThraP63058 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
ThraP63058 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ThraP63058 Gm45133-201ENSMUST00000207548 2773 ntBASIC15.21■□□□□ 0.03
ThraP63058 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ThraP63058 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ThraP63058 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
ThraP63058 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ThraP63058 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
ThraP63058 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
ThraP63058 Gm23935-201ENSMUST00000102303 57 ntBASIC15.21■□□□□ 0.03
ThraP63058 Gm24270-201ENSMUST00000102326 57 ntBASIC15.21■□□□□ 0.03
ThraP63058 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
ThraP63058 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC15.21■□□□□ 0.03
ThraP63058 Gm24245-201ENSMUST00000157318 57 ntBASIC15.21■□□□□ 0.03
ThraP63058 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC15.21■□□□□ 0.03
ThraP63058 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC15.21■□□□□ 0.03
ThraP63058 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
ThraP63058 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ThraP63058 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC15.21■□□□□ 0.03
ThraP63058 Gm10175-201ENSMUST00000086013 645 ntBASIC15.21■□□□□ 0.03
ThraP63058 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC15.21■□□□□ 0.03
ThraP63058 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ThraP63058 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
ThraP63058 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
ThraP63058 Gm45760-201ENSMUST00000212190 1782 ntBASIC15.21■□□□□ 0.02
ThraP63058 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
ThraP63058 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
ThraP63058 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.02
ThraP63058 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
ThraP63058 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ThraP63058 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ThraP63058 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ThraP63058 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ThraP63058 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
ThraP63058 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ThraP63058 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC15.2■□□□□ 0.02
ThraP63058 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ThraP63058 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
ThraP63058 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ThraP63058 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
ThraP63058 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ThraP63058 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ThraP63058 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
ThraP63058 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
ThraP63058 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ThraP63058 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ThraP63058 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ThraP63058 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
ThraP63058 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC15.2■□□□□ 0.02
ThraP63058 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC15.2■□□□□ 0.02
ThraP63058 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC15.2■□□□□ 0.02
ThraP63058 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ThraP63058 Gm2308-201ENSMUST00000166539 1004 ntBASIC15.2■□□□□ 0.02
ThraP63058 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC15.2■□□□□ 0.02
ThraP63058 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC15.2■□□□□ 0.02
ThraP63058 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC15.2■□□□□ 0.02
ThraP63058 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
ThraP63058 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ThraP63058 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
ThraP63058 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
ThraP63058 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ThraP63058 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ThraP63058 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ThraP63058 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ThraP63058 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ThraP63058 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ThraP63058 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ThraP63058 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
ThraP63058 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
ThraP63058 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ThraP63058 Gm11873-201ENSMUST00000117877 1304 ntBASIC15.19■□□□□ 0.02
ThraP63058 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ThraP63058 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ThraP63058 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
ThraP63058 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
ThraP63058 Gm38058-201ENSMUST00000194323 4368 ntBASIC15.19■□□□□ 0.02
ThraP63058 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ThraP63058 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ThraP63058 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ThraP63058 Gm8344-201ENSMUST00000119813 856 ntBASIC15.19■□□□□ 0.02
ThraP63058 Gm14822-201ENSMUST00000122247 291 ntBASIC15.19■□□□□ 0.02
ThraP63058 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
ThraP63058 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC15.19■□□□□ 0.02
ThraP63058 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC15.19■□□□□ 0.02
ThraP63058 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC15.19■□□□□ 0.02
ThraP63058 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
ThraP63058 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
ThraP63058 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms