Protein–RNA interactions for Protein: P62812

Gabra1, Gamma-aminobutyric acid receptor subunit alpha-1, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabra1P62812 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gabra1P62812 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Gabra1P62812 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gabra1P62812 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gabra1P62812 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gabra1P62812 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Gabra1P62812 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC12.66□□□□□ -0.38
Gabra1P62812 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gabra1P62812 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gabra1P62812 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Gabra1P62812 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gabra1P62812 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gabra1P62812 Prkcz2-201ENSMUST00000206136 1756 ntBASIC12.66□□□□□ -0.38
Gabra1P62812 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gabra1P62812 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gabra1P62812 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC12.65□□□□□ -0.38
Gabra1P62812 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gabra1P62812 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gabra1P62812 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gabra1P62812 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gabra1P62812 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Gabra1P62812 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gabra1P62812 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gabra1P62812 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gabra1P62812 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gabra1P62812 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Gabra1P62812 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gabra1P62812 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gabra1P62812 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC12.65□□□□□ -0.38
Gabra1P62812 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC12.65□□□□□ -0.38
Gabra1P62812 Gm12500-202ENSMUST00000186471 2428 ntBASIC12.65□□□□□ -0.38
Gabra1P62812 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Gabra1P62812 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gabra1P62812 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC12.65□□□□□ -0.38
Gabra1P62812 AC127302.2-201ENSMUST00000215212 268 ntBASIC12.65□□□□□ -0.38
Gabra1P62812 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gabra1P62812 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gabra1P62812 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gabra1P62812 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gabra1P62812 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gabra1P62812 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gabra1P62812 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gabra1P62812 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Gabra1P62812 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gabra1P62812 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gabra1P62812 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Gabra1P62812 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gabra1P62812 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Gabra1P62812 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Gabra1P62812 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC12.64□□□□□ -0.39
Gabra1P62812 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC12.64□□□□□ -0.39
Gabra1P62812 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gabra1P62812 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Gabra1P62812 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Gabra1P62812 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Gabra1P62812 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gabra1P62812 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gabra1P62812 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC12.64□□□□□ -0.39
Gabra1P62812 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gabra1P62812 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Gabra1P62812 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gabra1P62812 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gabra1P62812 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Gabra1P62812 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Gabra1P62812 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Gabra1P62812 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gabra1P62812 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Gabra1P62812 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Gabra1P62812 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Gabra1P62812 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gabra1P62812 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Gabra1P62812 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gabra1P62812 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
Gabra1P62812 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.64□□□□□ -0.39
Gabra1P62812 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gabra1P62812 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC12.64□□□□□ -0.39
Gabra1P62812 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gabra1P62812 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gabra1P62812 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gabra1P62812 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gabra1P62812 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gabra1P62812 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Gabra1P62812 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Gabra1P62812 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.63□□□□□ -0.39
Gabra1P62812 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Gabra1P62812 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC12.63□□□□□ -0.39
Gabra1P62812 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gabra1P62812 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gabra1P62812 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gabra1P62812 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Gabra1P62812 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gabra1P62812 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gabra1P62812 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC12.63□□□□□ -0.39
Gabra1P62812 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gabra1P62812 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gabra1P62812 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC12.63□□□□□ -0.39
Gabra1P62812 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC12.63□□□□□ -0.39
Gabra1P62812 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC12.63□□□□□ -0.39
Gabra1P62812 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC12.63□□□□□ -0.39
Gabra1P62812 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms