Protein–RNA interactions for Protein: P61406

Smg6, Telomerase-binding protein EST1A, mousemouse

Known RBP Predictions only

Length 1,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg6P61406 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smg6P61406 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC20.6■□□□□ 0.89
Smg6P61406 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smg6P61406 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smg6P61406 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smg6P61406 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smg6P61406 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smg6P61406 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smg6P61406 Fbxl12-205ENSMUST00000140702 1555 ntBASIC20.6■□□□□ 0.89
Smg6P61406 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smg6P61406 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smg6P61406 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC20.6■□□□□ 0.89
Smg6P61406 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Smg6P61406 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC20.6■□□□□ 0.89
Smg6P61406 Thap2-203ENSMUST00000218989 527 ntBASIC20.6■□□□□ 0.89
Smg6P61406 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smg6P61406 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Smg6P61406 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Smg6P61406 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smg6P61406 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smg6P61406 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smg6P61406 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smg6P61406 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Smg6P61406 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smg6P61406 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smg6P61406 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smg6P61406 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Smg6P61406 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smg6P61406 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Smg6P61406 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Smg6P61406 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Smg6P61406 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smg6P61406 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smg6P61406 Gm12892-201ENSMUST00000117367 1146 ntBASIC20.59■□□□□ 0.89
Smg6P61406 Gm12008-201ENSMUST00000117791 755 ntBASIC20.59■□□□□ 0.89
Smg6P61406 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Smg6P61406 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smg6P61406 Gm8396-201ENSMUST00000057361 823 ntBASIC20.59■□□□□ 0.89
Smg6P61406 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smg6P61406 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Smg6P61406 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Smg6P61406 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
Smg6P61406 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smg6P61406 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smg6P61406 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smg6P61406 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Smg6P61406 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC20.58■□□□□ 0.89
Smg6P61406 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Smg6P61406 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.89
Smg6P61406 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Smg6P61406 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Smg6P61406 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Smg6P61406 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Smg6P61406 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Smg6P61406 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Smg6P61406 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Smg6P61406 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Smg6P61406 Gm29361-201ENSMUST00000183323 2000 ntBASIC20.58■□□□□ 0.88
Smg6P61406 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Smg6P61406 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC20.58■□□□□ 0.88
Smg6P61406 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Smg6P61406 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Smg6P61406 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Smg6P61406 Gm44492-201ENSMUST00000197012 141 ntBASIC20.58■□□□□ 0.88
Smg6P61406 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC20.58■□□□□ 0.88
Smg6P61406 Gm44872-201ENSMUST00000207864 420 ntBASIC20.58■□□□□ 0.88
Smg6P61406 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Smg6P61406 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Smg6P61406 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Smg6P61406 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Smg6P61406 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Smg6P61406 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC20.58■□□□□ 0.88
Smg6P61406 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smg6P61406 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smg6P61406 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smg6P61406 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Smg6P61406 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Smg6P61406 Gm15427-201ENSMUST00000117288 531 ntBASIC20.57■□□□□ 0.88
Smg6P61406 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC20.57■□□□□ 0.88
Smg6P61406 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC20.57■□□□□ 0.88
Smg6P61406 AC124549.3-201ENSMUST00000225541 367 ntBASIC20.57■□□□□ 0.88
Smg6P61406 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC20.57■□□□□ 0.88
Smg6P61406 Gm10313-201ENSMUST00000095320 1002 ntBASIC20.57■□□□□ 0.88
Smg6P61406 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smg6P61406 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smg6P61406 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smg6P61406 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Smg6P61406 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC20.57■□□□□ 0.88
Smg6P61406 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Smg6P61406 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smg6P61406 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smg6P61406 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Smg6P61406 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Smg6P61406 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smg6P61406 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smg6P61406 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smg6P61406 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smg6P61406 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC20.56■□□□□ 0.88
Smg6P61406 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Smg6P61406 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC20.56■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms