Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sf3b6P59708 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC13.34□□□□□ -0.27
Sf3b6P59708 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sf3b6P59708 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sf3b6P59708 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sf3b6P59708 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sf3b6P59708 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC13.34□□□□□ -0.27
Sf3b6P59708 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Sf3b6P59708 Gm27742-201ENSMUST00000184667 60 ntBASIC13.34□□□□□ -0.27
Sf3b6P59708 AC158538.2-201ENSMUST00000225455 906 ntBASIC13.34□□□□□ -0.27
Sf3b6P59708 CT009510.1-201ENSMUST00000227972 270 ntBASIC13.34□□□□□ -0.27
Sf3b6P59708 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sf3b6P59708 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.34□□□□□ -0.27
Sf3b6P59708 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sf3b6P59708 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
Sf3b6P59708 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sf3b6P59708 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sf3b6P59708 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sf3b6P59708 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sf3b6P59708 Gm21009-201ENSMUST00000197169 1669 ntBASIC13.34□□□□□ -0.27
Sf3b6P59708 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC13.34□□□□□ -0.27
Sf3b6P59708 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sf3b6P59708 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Sf3b6P59708 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Sf3b6P59708 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Sf3b6P59708 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Sf3b6P59708 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sf3b6P59708 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sf3b6P59708 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Sf3b6P59708 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Sf3b6P59708 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sf3b6P59708 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Sf3b6P59708 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sf3b6P59708 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sf3b6P59708 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sf3b6P59708 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sf3b6P59708 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.33□□□□□ -0.28
Sf3b6P59708 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sf3b6P59708 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
Sf3b6P59708 Gm13312-201ENSMUST00000119631 718 ntBASIC13.33□□□□□ -0.28
Sf3b6P59708 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC13.33□□□□□ -0.28
Sf3b6P59708 Gm9172-201ENSMUST00000212092 954 ntBASIC13.33□□□□□ -0.28
Sf3b6P59708 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sf3b6P59708 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sf3b6P59708 Gm45293-201ENSMUST00000209754 1812 ntBASIC13.33□□□□□ -0.28
Sf3b6P59708 AC166574.6-201ENSMUST00000227889 1806 ntBASIC13.33□□□□□ -0.28
Sf3b6P59708 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sf3b6P59708 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Sf3b6P59708 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Sf3b6P59708 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Sf3b6P59708 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sf3b6P59708 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sf3b6P59708 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
Sf3b6P59708 Gm28182-201ENSMUST00000188354 2477 ntBASIC13.33□□□□□ -0.28
Sf3b6P59708 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Sf3b6P59708 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sf3b6P59708 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Sf3b6P59708 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sf3b6P59708 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sf3b6P59708 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sf3b6P59708 Gm10710-201ENSMUST00000047876 3971 ntBASIC13.32□□□□□ -0.28
Sf3b6P59708 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sf3b6P59708 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Sf3b6P59708 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sf3b6P59708 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sf3b6P59708 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sf3b6P59708 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Sf3b6P59708 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sf3b6P59708 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sf3b6P59708 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sf3b6P59708 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sf3b6P59708 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.32□□□□□ -0.28
Sf3b6P59708 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Sf3b6P59708 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sf3b6P59708 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sf3b6P59708 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Sf3b6P59708 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC13.32□□□□□ -0.28
Sf3b6P59708 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC13.32□□□□□ -0.28
Sf3b6P59708 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sf3b6P59708 Vti1a-206ENSMUST00000225529 1244 ntBASIC13.32□□□□□ -0.28
Sf3b6P59708 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sf3b6P59708 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sf3b6P59708 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Sf3b6P59708 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sf3b6P59708 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC13.32□□□□□ -0.28
Sf3b6P59708 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sf3b6P59708 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Sf3b6P59708 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
Sf3b6P59708 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sf3b6P59708 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sf3b6P59708 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sf3b6P59708 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sf3b6P59708 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sf3b6P59708 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sf3b6P59708 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sf3b6P59708 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sf3b6P59708 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sf3b6P59708 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sf3b6P59708 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Sf3b6P59708 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms