Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC12.15□□□□□ -0.46
Sssca1P56873 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sssca1P56873 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sssca1P56873 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sssca1P56873 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sssca1P56873 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sssca1P56873 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sssca1P56873 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC12.15□□□□□ -0.46
Sssca1P56873 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC12.15□□□□□ -0.46
Sssca1P56873 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC12.15□□□□□ -0.46
Sssca1P56873 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sssca1P56873 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sssca1P56873 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sssca1P56873 Gm10231-201ENSMUST00000181584 441 ntBASIC12.15□□□□□ -0.46
Sssca1P56873 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sssca1P56873 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC12.15□□□□□ -0.46
Sssca1P56873 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC12.15□□□□□ -0.46
Sssca1P56873 Gm10175-202ENSMUST00000208752 441 ntBASIC12.15□□□□□ -0.46
Sssca1P56873 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sssca1P56873 Gm18622-201ENSMUST00000219361 595 ntBASIC12.15□□□□□ -0.46
Sssca1P56873 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC12.15□□□□□ -0.46
Sssca1P56873 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sssca1P56873 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sssca1P56873 Gm12620-201ENSMUST00000119791 1986 ntBASIC12.15□□□□□ -0.46
Sssca1P56873 Gm12612-201ENSMUST00000140182 1986 ntBASIC12.15□□□□□ -0.46
Sssca1P56873 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sssca1P56873 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sssca1P56873 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sssca1P56873 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sssca1P56873 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sssca1P56873 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Sssca1P56873 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sssca1P56873 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sssca1P56873 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sssca1P56873 Grk6-207ENSMUST00000225925 2769 ntBASIC12.15□□□□□ -0.46
Sssca1P56873 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sssca1P56873 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sssca1P56873 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sssca1P56873 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sssca1P56873 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sssca1P56873 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sssca1P56873 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Sssca1P56873 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
Sssca1P56873 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC12.15□□□□□ -0.47
Sssca1P56873 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Sssca1P56873 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Sssca1P56873 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Sssca1P56873 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC12.14□□□□□ -0.47
Sssca1P56873 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sssca1P56873 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC12.14□□□□□ -0.47
Sssca1P56873 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sssca1P56873 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sssca1P56873 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sssca1P56873 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sssca1P56873 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sssca1P56873 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sssca1P56873 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sssca1P56873 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Sssca1P56873 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sssca1P56873 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sssca1P56873 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Sssca1P56873 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sssca1P56873 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC12.14□□□□□ -0.47
Sssca1P56873 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC12.14□□□□□ -0.47
Sssca1P56873 Gm25745-201ENSMUST00000174945 133 ntBASIC12.14□□□□□ -0.47
Sssca1P56873 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Sssca1P56873 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC12.14□□□□□ -0.47
Sssca1P56873 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sssca1P56873 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC12.14□□□□□ -0.47
Sssca1P56873 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC12.14□□□□□ -0.47
Sssca1P56873 AC158538.2-201ENSMUST00000225455 906 ntBASIC12.14□□□□□ -0.47
Sssca1P56873 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sssca1P56873 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sssca1P56873 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sssca1P56873 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sssca1P56873 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sssca1P56873 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC12.14□□□□□ -0.47
Sssca1P56873 Gm10710-201ENSMUST00000047876 3971 ntBASIC12.14□□□□□ -0.47
Sssca1P56873 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sssca1P56873 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sssca1P56873 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sssca1P56873 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sssca1P56873 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sssca1P56873 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Sssca1P56873 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sssca1P56873 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sssca1P56873 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sssca1P56873 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC12.13□□□□□ -0.47
Sssca1P56873 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sssca1P56873 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sssca1P56873 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Sssca1P56873 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sssca1P56873 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sssca1P56873 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sssca1P56873 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC12.13□□□□□ -0.47
Sssca1P56873 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Sssca1P56873 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sssca1P56873 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sssca1P56873 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC12.13□□□□□ -0.47
Sssca1P56873 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms