Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pdx1P52946 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pdx1P52946 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pdx1P52946 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14.85□□□□□ -0.03
Pdx1P52946 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pdx1P52946 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Pdx1P52946 Gm17968-201ENSMUST00000194902 784 ntBASIC14.85□□□□□ -0.03
Pdx1P52946 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC14.85□□□□□ -0.03
Pdx1P52946 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pdx1P52946 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pdx1P52946 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pdx1P52946 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pdx1P52946 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pdx1P52946 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pdx1P52946 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pdx1P52946 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.85□□□□□ -0.03
Pdx1P52946 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.85□□□□□ -0.03
Pdx1P52946 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.85□□□□□ -0.03
Pdx1P52946 Efs-202ENSMUST00000227037 2540 ntBASIC14.85□□□□□ -0.03
Pdx1P52946 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pdx1P52946 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pdx1P52946 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pdx1P52946 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.84□□□□□ -0.03
Pdx1P52946 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pdx1P52946 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.84□□□□□ -0.03
Pdx1P52946 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Pdx1P52946 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pdx1P52946 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pdx1P52946 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pdx1P52946 Gm11779-201ENSMUST00000118541 368 ntBASIC14.84□□□□□ -0.03
Pdx1P52946 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.84□□□□□ -0.03
Pdx1P52946 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC14.84□□□□□ -0.03
Pdx1P52946 Gm44945-201ENSMUST00000206764 1187 ntBASIC14.84□□□□□ -0.03
Pdx1P52946 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pdx1P52946 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pdx1P52946 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pdx1P52946 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Pdx1P52946 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pdx1P52946 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pdx1P52946 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.84□□□□□ -0.03
Pdx1P52946 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pdx1P52946 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.84□□□□□ -0.03
Pdx1P52946 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pdx1P52946 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pdx1P52946 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pdx1P52946 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pdx1P52946 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Pdx1P52946 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Pdx1P52946 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.83□□□□□ -0.03
Pdx1P52946 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC14.83□□□□□ -0.03
Pdx1P52946 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Pdx1P52946 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Pdx1P52946 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pdx1P52946 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.83□□□□□ -0.04
Pdx1P52946 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pdx1P52946 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pdx1P52946 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Pdx1P52946 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Pdx1P52946 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pdx1P52946 Gm5177-201ENSMUST00000183092 997 ntBASIC14.83□□□□□ -0.04
Pdx1P52946 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Pdx1P52946 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pdx1P52946 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.83□□□□□ -0.04
Pdx1P52946 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pdx1P52946 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pdx1P52946 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Pdx1P52946 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pdx1P52946 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pdx1P52946 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Pdx1P52946 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.83□□□□□ -0.04
Pdx1P52946 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
Pdx1P52946 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pdx1P52946 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pdx1P52946 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pdx1P52946 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Pdx1P52946 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pdx1P52946 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pdx1P52946 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pdx1P52946 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pdx1P52946 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pdx1P52946 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pdx1P52946 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pdx1P52946 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pdx1P52946 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pdx1P52946 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pdx1P52946 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pdx1P52946 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pdx1P52946 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pdx1P52946 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.82□□□□□ -0.04
Pdx1P52946 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pdx1P52946 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC14.82□□□□□ -0.04
Pdx1P52946 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Pdx1P52946 AC090659.1-201ENSMUST00000224334 768 ntBASIC14.82□□□□□ -0.04
Pdx1P52946 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pdx1P52946 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.82□□□□□ -0.04
Pdx1P52946 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pdx1P52946 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pdx1P52946 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Pdx1P52946 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pdx1P52946 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms