Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RoraP51448 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RoraP51448 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC14.19□□□□□ -0.14
RoraP51448 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC14.19□□□□□ -0.14
RoraP51448 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC14.19□□□□□ -0.14
RoraP51448 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC14.19□□□□□ -0.14
RoraP51448 Gm5628-201ENSMUST00000222318 1049 ntBASIC14.19□□□□□ -0.14
RoraP51448 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC14.19□□□□□ -0.14
RoraP51448 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC14.19□□□□□ -0.14
RoraP51448 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
RoraP51448 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RoraP51448 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RoraP51448 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.19□□□□□ -0.14
RoraP51448 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RoraP51448 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RoraP51448 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RoraP51448 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RoraP51448 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
RoraP51448 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
RoraP51448 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RoraP51448 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RoraP51448 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RoraP51448 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RoraP51448 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RoraP51448 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RoraP51448 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RoraP51448 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RoraP51448 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RoraP51448 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.18□□□□□ -0.14
RoraP51448 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
RoraP51448 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RoraP51448 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
RoraP51448 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
RoraP51448 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RoraP51448 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
RoraP51448 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.18□□□□□ -0.14
RoraP51448 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
RoraP51448 Gm15920-201ENSMUST00000118998 402 ntBASIC14.18□□□□□ -0.14
RoraP51448 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.18□□□□□ -0.14
RoraP51448 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC14.18□□□□□ -0.14
RoraP51448 Gm44335-201ENSMUST00000196879 141 ntBASIC14.18□□□□□ -0.14
RoraP51448 Gm44297-201ENSMUST00000198304 141 ntBASIC14.18□□□□□ -0.14
RoraP51448 Gm44346-201ENSMUST00000198851 141 ntBASIC14.18□□□□□ -0.14
RoraP51448 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC14.18□□□□□ -0.14
RoraP51448 Gpr146-202ENSMUST00000053120 1040 ntBASIC14.18□□□□□ -0.14
RoraP51448 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RoraP51448 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RoraP51448 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
RoraP51448 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
RoraP51448 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
RoraP51448 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RoraP51448 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RoraP51448 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
RoraP51448 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RoraP51448 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.18□□□□□ -0.14
RoraP51448 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RoraP51448 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.18□□□□□ -0.14
RoraP51448 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RoraP51448 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RoraP51448 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RoraP51448 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
RoraP51448 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
RoraP51448 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RoraP51448 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RoraP51448 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
RoraP51448 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RoraP51448 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
RoraP51448 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RoraP51448 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RoraP51448 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RoraP51448 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RoraP51448 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC14.17□□□□□ -0.14
RoraP51448 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
RoraP51448 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC14.17□□□□□ -0.14
RoraP51448 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
RoraP51448 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
RoraP51448 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RoraP51448 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
RoraP51448 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RoraP51448 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
RoraP51448 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RoraP51448 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RoraP51448 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RoraP51448 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RoraP51448 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RoraP51448 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RoraP51448 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RoraP51448 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RoraP51448 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RoraP51448 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RoraP51448 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RoraP51448 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.16□□□□□ -0.14
RoraP51448 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RoraP51448 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RoraP51448 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
RoraP51448 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
RoraP51448 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RoraP51448 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RoraP51448 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RoraP51448 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms