Protein–RNA interactions for Protein: P46935

Nedd4, E3 ubiquitin-protein ligase NEDD4, mousemouse

Known RBP Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd4P46935 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Nedd4P46935 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nedd4P46935 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nedd4P46935 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nedd4P46935 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nedd4P46935 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nedd4P46935 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Nedd4P46935 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nedd4P46935 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nedd4P46935 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Nedd4P46935 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC17.96■□□□□ 0.47
Nedd4P46935 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC17.96■□□□□ 0.47
Nedd4P46935 Gm45841-201ENSMUST00000207700 164 ntBASIC17.96■□□□□ 0.47
Nedd4P46935 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC17.96■□□□□ 0.47
Nedd4P46935 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Nedd4P46935 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nedd4P46935 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Nedd4P46935 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nedd4P46935 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Nedd4P46935 AC069562.2-201ENSMUST00000224644 2146 ntBASIC17.96■□□□□ 0.47
Nedd4P46935 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC17.96■□□□□ 0.47
Nedd4P46935 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC17.96■□□□□ 0.47
Nedd4P46935 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nedd4P46935 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
Nedd4P46935 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.96■□□□□ 0.46
Nedd4P46935 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Nedd4P46935 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.46
Nedd4P46935 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Nedd4P46935 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nedd4P46935 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nedd4P46935 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nedd4P46935 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nedd4P46935 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
Nedd4P46935 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.95■□□□□ 0.46
Nedd4P46935 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nedd4P46935 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nedd4P46935 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nedd4P46935 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nedd4P46935 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC17.95■□□□□ 0.46
Nedd4P46935 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC17.95■□□□□ 0.46
Nedd4P46935 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Nedd4P46935 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC17.95■□□□□ 0.46
Nedd4P46935 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC17.95■□□□□ 0.46
Nedd4P46935 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nedd4P46935 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nedd4P46935 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nedd4P46935 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nedd4P46935 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Nedd4P46935 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nedd4P46935 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nedd4P46935 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nedd4P46935 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
Nedd4P46935 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Nedd4P46935 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nedd4P46935 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC17.95■□□□□ 0.46
Nedd4P46935 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nedd4P46935 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nedd4P46935 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Nedd4P46935 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nedd4P46935 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC17.94■□□□□ 0.46
Nedd4P46935 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
Nedd4P46935 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nedd4P46935 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
Nedd4P46935 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nedd4P46935 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC17.94■□□□□ 0.46
Nedd4P46935 Gm5479-201ENSMUST00000160578 435 ntBASIC17.94■□□□□ 0.46
Nedd4P46935 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC17.94■□□□□ 0.46
Nedd4P46935 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nedd4P46935 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC17.94■□□□□ 0.46
Nedd4P46935 AC162801.1-201ENSMUST00000220612 198 ntBASIC17.94■□□□□ 0.46
Nedd4P46935 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC17.94■□□□□ 0.46
Nedd4P46935 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC17.94■□□□□ 0.46
Nedd4P46935 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
Nedd4P46935 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
Nedd4P46935 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC17.94■□□□□ 0.46
Nedd4P46935 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nedd4P46935 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nedd4P46935 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
Nedd4P46935 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nedd4P46935 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Nedd4P46935 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Nedd4P46935 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nedd4P46935 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nedd4P46935 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nedd4P46935 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nedd4P46935 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Nedd4P46935 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC17.93■□□□□ 0.46
Nedd4P46935 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nedd4P46935 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nedd4P46935 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nedd4P46935 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nedd4P46935 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nedd4P46935 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Nedd4P46935 Gm12957-201ENSMUST00000117835 377 ntBASIC17.93■□□□□ 0.46
Nedd4P46935 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nedd4P46935 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Nedd4P46935 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Nedd4P46935 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC17.93■□□□□ 0.46
Nedd4P46935 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Nedd4P46935 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms