Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Vps4bP46467 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Vps4bP46467 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps4bP46467 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Vps4bP46467 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps4bP46467 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Vps4bP46467 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps4bP46467 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps4bP46467 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps4bP46467 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Vps4bP46467 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Vps4bP46467 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC15.23■□□□□ 0.03
Vps4bP46467 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps4bP46467 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Vps4bP46467 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps4bP46467 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps4bP46467 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps4bP46467 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps4bP46467 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC15.23■□□□□ 0.03
Vps4bP46467 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC15.23■□□□□ 0.03
Vps4bP46467 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps4bP46467 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps4bP46467 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps4bP46467 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Vps4bP46467 Gm10499-201ENSMUST00000174094 934 ntBASIC15.23■□□□□ 0.03
Vps4bP46467 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps4bP46467 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps4bP46467 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Vps4bP46467 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps4bP46467 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps4bP46467 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vps4bP46467 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Vps4bP46467 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Vps4bP46467 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Vps4bP46467 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps4bP46467 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Vps4bP46467 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps4bP46467 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps4bP46467 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps4bP46467 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps4bP46467 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps4bP46467 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Vps4bP46467 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps4bP46467 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps4bP46467 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps4bP46467 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC15.22■□□□□ 0.03
Vps4bP46467 Gm11452-201ENSMUST00000122376 690 ntBASIC15.22■□□□□ 0.03
Vps4bP46467 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
Vps4bP46467 Gm18489-201ENSMUST00000172565 551 ntBASIC15.22■□□□□ 0.03
Vps4bP46467 Gm18206-201ENSMUST00000207027 926 ntBASIC15.22■□□□□ 0.03
Vps4bP46467 AC159301.1-201ENSMUST00000225130 1182 ntBASIC15.22■□□□□ 0.03
Vps4bP46467 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps4bP46467 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps4bP46467 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps4bP46467 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps4bP46467 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps4bP46467 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC15.22■□□□□ 0.03
Vps4bP46467 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps4bP46467 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Vps4bP46467 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC15.22■□□□□ 0.03
Vps4bP46467 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vps4bP46467 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vps4bP46467 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vps4bP46467 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Vps4bP46467 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vps4bP46467 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vps4bP46467 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Vps4bP46467 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vps4bP46467 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC15.21■□□□□ 0.03
Vps4bP46467 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Vps4bP46467 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vps4bP46467 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC15.21■□□□□ 0.03
Vps4bP46467 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC15.21■□□□□ 0.03
Vps4bP46467 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Vps4bP46467 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC15.21■□□□□ 0.03
Vps4bP46467 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Vps4bP46467 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vps4bP46467 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vps4bP46467 Gm37736-201ENSMUST00000193564 2802 ntBASIC15.21■□□□□ 0.03
Vps4bP46467 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vps4bP46467 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vps4bP46467 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC15.21■□□□□ 0.03
Vps4bP46467 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
Vps4bP46467 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Vps4bP46467 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Vps4bP46467 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
Vps4bP46467 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Vps4bP46467 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Vps4bP46467 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Vps4bP46467 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC15.2■□□□□ 0.02
Vps4bP46467 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Vps4bP46467 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Vps4bP46467 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vps4bP46467 Gm11185-201ENSMUST00000117732 1007 ntBASIC15.2■□□□□ 0.02
Vps4bP46467 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Vps4bP46467 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC15.2■□□□□ 0.02
Vps4bP46467 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC15.2■□□□□ 0.02
Vps4bP46467 Gm43073-201ENSMUST00000198200 1189 ntBASIC15.2■□□□□ 0.02
Vps4bP46467 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Vps4bP46467 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms