Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx2-6P43688 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx2-6P43688 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx2-6P43688 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.21□□□□□ -0.13
Nkx2-6P43688 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx2-6P43688 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx2-6P43688 Gm12017-201ENSMUST00000122453 1003 ntBASIC14.21□□□□□ -0.13
Nkx2-6P43688 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx2-6P43688 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Nkx2-6P43688 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx2-6P43688 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC14.21□□□□□ -0.13
Nkx2-6P43688 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC14.21□□□□□ -0.13
Nkx2-6P43688 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC14.21□□□□□ -0.13
Nkx2-6P43688 AC124732.2-201ENSMUST00000221977 316 ntBASIC14.21□□□□□ -0.13
Nkx2-6P43688 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx2-6P43688 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx2-6P43688 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx2-6P43688 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Nkx2-6P43688 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx2-6P43688 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx2-6P43688 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx2-6P43688 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx2-6P43688 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Nkx2-6P43688 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nkx2-6P43688 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nkx2-6P43688 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nkx2-6P43688 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.14
Nkx2-6P43688 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Nkx2-6P43688 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.2□□□□□ -0.14
Nkx2-6P43688 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-6P43688 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-6P43688 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-6P43688 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-6P43688 Fgf17-202ENSMUST00000227123 1336 ntBASIC14.2□□□□□ -0.14
Nkx2-6P43688 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.2□□□□□ -0.14
Nkx2-6P43688 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-6P43688 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-6P43688 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Nkx2-6P43688 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC14.2□□□□□ -0.14
Nkx2-6P43688 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-6P43688 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-6P43688 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-6P43688 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-6P43688 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC14.2□□□□□ -0.14
Nkx2-6P43688 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-6P43688 Gm10253-201ENSMUST00000194270 940 ntBASIC14.2□□□□□ -0.14
Nkx2-6P43688 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC14.2□□□□□ -0.14
Nkx2-6P43688 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-6P43688 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-6P43688 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Nkx2-6P43688 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Nkx2-6P43688 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-6P43688 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-6P43688 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-6P43688 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-6P43688 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-6P43688 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-6P43688 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-6P43688 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-6P43688 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-6P43688 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-6P43688 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-6P43688 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-6P43688 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx2-6P43688 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx2-6P43688 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx2-6P43688 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx2-6P43688 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx2-6P43688 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx2-6P43688 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx2-6P43688 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx2-6P43688 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.19□□□□□ -0.14
Nkx2-6P43688 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Nkx2-6P43688 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx2-6P43688 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx2-6P43688 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx2-6P43688 Mir7023-201ENSMUST00000185093 64 ntBASIC14.19□□□□□ -0.14
Nkx2-6P43688 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx2-6P43688 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC14.19□□□□□ -0.14
Nkx2-6P43688 AC131187.1-201ENSMUST00000224567 809 ntBASIC14.19□□□□□ -0.14
Nkx2-6P43688 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx2-6P43688 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx2-6P43688 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.19□□□□□ -0.14
Nkx2-6P43688 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Nkx2-6P43688 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx2-6P43688 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.19□□□□□ -0.14
Nkx2-6P43688 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx2-6P43688 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx2-6P43688 CT025626.1-201ENSMUST00000223735 1455 ntBASIC14.18□□□□□ -0.14
Nkx2-6P43688 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx2-6P43688 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Nkx2-6P43688 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx2-6P43688 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx2-6P43688 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Nkx2-6P43688 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx2-6P43688 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx2-6P43688 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.18□□□□□ -0.14
Nkx2-6P43688 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx2-6P43688 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx2-6P43688 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms