Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdx2P43241 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdx2P43241 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdx2P43241 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdx2P43241 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cdx2P43241 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdx2P43241 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdx2P43241 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cdx2P43241 Celf4-206ENSMUST00000224553 1729 ntBASIC14.19□□□□□ -0.14
Cdx2P43241 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdx2P43241 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdx2P43241 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC14.19□□□□□ -0.14
Cdx2P43241 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC14.19□□□□□ -0.14
Cdx2P43241 Gm12490-201ENSMUST00000120255 560 ntBASIC14.19□□□□□ -0.14
Cdx2P43241 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC14.19□□□□□ -0.14
Cdx2P43241 Gm5479-201ENSMUST00000160578 435 ntBASIC14.19□□□□□ -0.14
Cdx2P43241 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cdx2P43241 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cdx2P43241 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdx2P43241 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdx2P43241 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.19□□□□□ -0.14
Cdx2P43241 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.19□□□□□ -0.14
Cdx2P43241 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cdx2P43241 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdx2P43241 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdx2P43241 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Cdx2P43241 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdx2P43241 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdx2P43241 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdx2P43241 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cdx2P43241 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC14.18□□□□□ -0.14
Cdx2P43241 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cdx2P43241 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdx2P43241 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdx2P43241 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdx2P43241 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdx2P43241 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Cdx2P43241 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Cdx2P43241 Gm12859-201ENSMUST00000117834 427 ntBASIC14.18□□□□□ -0.14
Cdx2P43241 Gm14928-201ENSMUST00000120198 477 ntBASIC14.18□□□□□ -0.14
Cdx2P43241 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cdx2P43241 Gm24694-201ENSMUST00000180054 110 ntBASIC14.18□□□□□ -0.14
Cdx2P43241 Gm27663-201ENSMUST00000184839 110 ntBASIC14.18□□□□□ -0.14
Cdx2P43241 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cdx2P43241 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Cdx2P43241 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdx2P43241 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdx2P43241 Gm19430-201ENSMUST00000193847 2137 ntBASIC14.18□□□□□ -0.14
Cdx2P43241 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdx2P43241 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdx2P43241 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.18□□□□□ -0.14
Cdx2P43241 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdx2P43241 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.18□□□□□ -0.14
Cdx2P43241 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cdx2P43241 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.17□□□□□ -0.14
Cdx2P43241 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdx2P43241 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdx2P43241 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdx2P43241 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdx2P43241 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdx2P43241 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdx2P43241 Gm8242-201ENSMUST00000193029 1420 ntBASIC14.17□□□□□ -0.14
Cdx2P43241 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdx2P43241 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Cdx2P43241 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC14.17□□□□□ -0.14
Cdx2P43241 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdx2P43241 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Cdx2P43241 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Cdx2P43241 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdx2P43241 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC14.17□□□□□ -0.14
Cdx2P43241 Mir1897-201ENSMUST00000122581 272 ntBASIC14.17□□□□□ -0.14
Cdx2P43241 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC14.17□□□□□ -0.14
Cdx2P43241 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cdx2P43241 Gm29667-201ENSMUST00000190817 490 ntBASIC14.17□□□□□ -0.14
Cdx2P43241 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC14.17□□□□□ -0.14
Cdx2P43241 AL593843.1-201ENSMUST00000195891 145 ntBASIC14.17□□□□□ -0.14
Cdx2P43241 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC14.17□□□□□ -0.14
Cdx2P43241 AC238811.1-201ENSMUST00000225302 441 ntBASIC14.17□□□□□ -0.14
Cdx2P43241 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdx2P43241 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdx2P43241 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdx2P43241 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdx2P43241 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Cdx2P43241 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdx2P43241 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdx2P43241 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdx2P43241 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdx2P43241 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Cdx2P43241 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdx2P43241 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdx2P43241 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdx2P43241 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdx2P43241 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Cdx2P43241 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cdx2P43241 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cdx2P43241 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdx2P43241 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdx2P43241 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Cdx2P43241 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cdx2P43241 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 73.1 ms