Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Abca1P41233 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Abca1P41233 Gm18889-201ENSMUST00000174284 929 ntBASIC12.5□□□□□ -0.41
Abca1P41233 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC12.5□□□□□ -0.41
Abca1P41233 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Abca1P41233 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Abca1P41233 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC12.5□□□□□ -0.41
Abca1P41233 Gm20553-201ENSMUST00000204205 844 ntBASIC12.5□□□□□ -0.41
Abca1P41233 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC12.5□□□□□ -0.41
Abca1P41233 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Abca1P41233 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Abca1P41233 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Abca1P41233 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Abca1P41233 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Abca1P41233 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Abca1P41233 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Abca1P41233 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Abca1P41233 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Abca1P41233 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Abca1P41233 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Abca1P41233 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Abca1P41233 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Abca1P41233 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Abca1P41233 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Abca1P41233 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Abca1P41233 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Abca1P41233 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Abca1P41233 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Abca1P41233 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Abca1P41233 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Abca1P41233 Gm12008-201ENSMUST00000117791 755 ntBASIC12.5□□□□□ -0.41
Abca1P41233 Gm5866-201ENSMUST00000177881 973 ntBASIC12.5□□□□□ -0.41
Abca1P41233 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC12.5□□□□□ -0.41
Abca1P41233 AC158538.2-201ENSMUST00000225455 906 ntBASIC12.5□□□□□ -0.41
Abca1P41233 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Abca1P41233 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Abca1P41233 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Abca1P41233 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Abca1P41233 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC12.5□□□□□ -0.41
Abca1P41233 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Abca1P41233 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Abca1P41233 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC12.5□□□□□ -0.41
Abca1P41233 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Abca1P41233 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Abca1P41233 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Abca1P41233 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Abca1P41233 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Abca1P41233 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Abca1P41233 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Abca1P41233 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Abca1P41233 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Abca1P41233 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC12.49□□□□□ -0.41
Abca1P41233 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Abca1P41233 Gm27306-201ENSMUST00000183970 107 ntBASIC12.49□□□□□ -0.41
Abca1P41233 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC12.49□□□□□ -0.41
Abca1P41233 AC126408.1-201ENSMUST00000225184 523 ntBASIC12.49□□□□□ -0.41
Abca1P41233 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Abca1P41233 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Abca1P41233 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Abca1P41233 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Abca1P41233 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Abca1P41233 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Abca1P41233 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Abca1P41233 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Abca1P41233 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Abca1P41233 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Abca1P41233 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Abca1P41233 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Abca1P41233 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Abca1P41233 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Abca1P41233 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Abca1P41233 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Abca1P41233 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Abca1P41233 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Abca1P41233 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC12.49□□□□□ -0.41
Abca1P41233 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Abca1P41233 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Abca1P41233 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Abca1P41233 Gm25287-201ENSMUST00000103846 110 ntBASIC12.49□□□□□ -0.41
Abca1P41233 Gm22918-201ENSMUST00000103855 110 ntBASIC12.49□□□□□ -0.41
Abca1P41233 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Abca1P41233 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC12.49□□□□□ -0.41
Abca1P41233 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC12.49□□□□□ -0.41
Abca1P41233 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Abca1P41233 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Abca1P41233 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Abca1P41233 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Abca1P41233 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Abca1P41233 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Abca1P41233 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Abca1P41233 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Abca1P41233 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Abca1P41233 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Abca1P41233 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Abca1P41233 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Abca1P41233 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Abca1P41233 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Abca1P41233 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Abca1P41233 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC12.48□□□□□ -0.41
Abca1P41233 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms