Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdh4P39038 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cdh4P39038 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdh4P39038 Gm13597-201ENSMUST00000121239 375 ntBASIC14.37□□□□□ -0.11
Cdh4P39038 Gm43332-201ENSMUST00000202511 1044 ntBASIC14.37□□□□□ -0.11
Cdh4P39038 Gm7229-201ENSMUST00000214719 1007 ntBASIC14.37□□□□□ -0.11
Cdh4P39038 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdh4P39038 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdh4P39038 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.37□□□□□ -0.11
Cdh4P39038 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdh4P39038 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdh4P39038 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdh4P39038 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdh4P39038 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdh4P39038 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdh4P39038 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cdh4P39038 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdh4P39038 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdh4P39038 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdh4P39038 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cdh4P39038 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdh4P39038 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cdh4P39038 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.36□□□□□ -0.11
Cdh4P39038 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdh4P39038 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdh4P39038 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdh4P39038 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cdh4P39038 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Cdh4P39038 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdh4P39038 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.36□□□□□ -0.11
Cdh4P39038 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdh4P39038 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdh4P39038 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cdh4P39038 Gm12008-201ENSMUST00000117791 755 ntBASIC14.36□□□□□ -0.11
Cdh4P39038 Gm14494-201ENSMUST00000118786 435 ntBASIC14.36□□□□□ -0.11
Cdh4P39038 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cdh4P39038 Mir3113-201ENSMUST00000175478 76 ntBASIC14.36□□□□□ -0.11
Cdh4P39038 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cdh4P39038 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdh4P39038 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC14.36□□□□□ -0.11
Cdh4P39038 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Cdh4P39038 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdh4P39038 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Cdh4P39038 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Cdh4P39038 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdh4P39038 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cdh4P39038 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Cdh4P39038 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdh4P39038 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdh4P39038 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdh4P39038 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC14.36□□□□□ -0.11
Cdh4P39038 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdh4P39038 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdh4P39038 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdh4P39038 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cdh4P39038 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
Cdh4P39038 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cdh4P39038 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdh4P39038 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cdh4P39038 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdh4P39038 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdh4P39038 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdh4P39038 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdh4P39038 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdh4P39038 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC14.35□□□□□ -0.11
Cdh4P39038 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Cdh4P39038 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Cdh4P39038 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdh4P39038 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdh4P39038 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC14.35□□□□□ -0.11
Cdh4P39038 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdh4P39038 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdh4P39038 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Cdh4P39038 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdh4P39038 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdh4P39038 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdh4P39038 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdh4P39038 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdh4P39038 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdh4P39038 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdh4P39038 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Cdh4P39038 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdh4P39038 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cdh4P39038 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.34□□□□□ -0.11
Cdh4P39038 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdh4P39038 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdh4P39038 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cdh4P39038 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cdh4P39038 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdh4P39038 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdh4P39038 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cdh4P39038 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdh4P39038 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cdh4P39038 Gm8242-201ENSMUST00000193029 1420 ntBASIC14.34□□□□□ -0.11
Cdh4P39038 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Cdh4P39038 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdh4P39038 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Cdh4P39038 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdh4P39038 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdh4P39038 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms