Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LdlrP35951 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
LdlrP35951 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
LdlrP35951 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LdlrP35951 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.95□□□□□ -0.02
LdlrP35951 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
LdlrP35951 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LdlrP35951 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LdlrP35951 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
LdlrP35951 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LdlrP35951 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LdlrP35951 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
LdlrP35951 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LdlrP35951 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
LdlrP35951 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LdlrP35951 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
LdlrP35951 Grk6-207ENSMUST00000225925 2769 ntBASIC14.94□□□□□ -0.02
LdlrP35951 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.94□□□□□ -0.02
LdlrP35951 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
LdlrP35951 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.94□□□□□ -0.02
LdlrP35951 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LdlrP35951 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC14.94□□□□□ -0.02
LdlrP35951 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC14.94□□□□□ -0.02
LdlrP35951 Gm11779-201ENSMUST00000118541 368 ntBASIC14.94□□□□□ -0.02
LdlrP35951 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LdlrP35951 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LdlrP35951 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC14.94□□□□□ -0.02
LdlrP35951 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC14.94□□□□□ -0.02
LdlrP35951 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
LdlrP35951 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LdlrP35951 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LdlrP35951 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
LdlrP35951 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LdlrP35951 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LdlrP35951 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
LdlrP35951 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
LdlrP35951 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LdlrP35951 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.93□□□□□ -0.02
LdlrP35951 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LdlrP35951 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LdlrP35951 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LdlrP35951 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LdlrP35951 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LdlrP35951 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LdlrP35951 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LdlrP35951 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
LdlrP35951 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
LdlrP35951 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
LdlrP35951 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LdlrP35951 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LdlrP35951 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
LdlrP35951 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC14.93□□□□□ -0.02
LdlrP35951 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC14.93□□□□□ -0.02
LdlrP35951 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.93□□□□□ -0.02
LdlrP35951 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LdlrP35951 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LdlrP35951 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LdlrP35951 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LdlrP35951 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LdlrP35951 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC14.93□□□□□ -0.02
LdlrP35951 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LdlrP35951 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LdlrP35951 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC14.93□□□□□ -0.02
LdlrP35951 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
LdlrP35951 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LdlrP35951 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LdlrP35951 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
LdlrP35951 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.93□□□□□ -0.02
LdlrP35951 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.93□□□□□ -0.02
LdlrP35951 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LdlrP35951 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
LdlrP35951 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LdlrP35951 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
LdlrP35951 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LdlrP35951 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LdlrP35951 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LdlrP35951 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LdlrP35951 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.92□□□□□ -0.02
LdlrP35951 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
LdlrP35951 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LdlrP35951 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
LdlrP35951 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LdlrP35951 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LdlrP35951 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
LdlrP35951 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LdlrP35951 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
LdlrP35951 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
LdlrP35951 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC14.92□□□□□ -0.02
LdlrP35951 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC14.92□□□□□ -0.02
LdlrP35951 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
LdlrP35951 Gm5264-201ENSMUST00000190584 848 ntBASIC14.92□□□□□ -0.02
LdlrP35951 Gm18622-201ENSMUST00000219361 595 ntBASIC14.92□□□□□ -0.02
LdlrP35951 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
LdlrP35951 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LdlrP35951 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.92□□□□□ -0.02
LdlrP35951 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LdlrP35951 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
LdlrP35951 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
LdlrP35951 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
LdlrP35951 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms