Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rom1P32958 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rom1P32958 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC11.89□□□□□ -0.51
Rom1P32958 Gm15039-201ENSMUST00000118914 875 ntBASIC11.89□□□□□ -0.51
Rom1P32958 Gm13436-201ENSMUST00000120418 567 ntBASIC11.89□□□□□ -0.51
Rom1P32958 Gm10653-202ENSMUST00000139570 835 ntBASIC11.89□□□□□ -0.51
Rom1P32958 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rom1P32958 Gm8349-201ENSMUST00000182720 1003 ntBASIC11.89□□□□□ -0.51
Rom1P32958 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC11.89□□□□□ -0.51
Rom1P32958 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rom1P32958 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rom1P32958 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rom1P32958 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rom1P32958 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rom1P32958 Mxra8os-201ENSMUST00000097740 687 ntBASIC11.89□□□□□ -0.51
Rom1P32958 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rom1P32958 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rom1P32958 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rom1P32958 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Rom1P32958 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC11.89□□□□□ -0.51
Rom1P32958 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rom1P32958 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Rom1P32958 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rom1P32958 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rom1P32958 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rom1P32958 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rom1P32958 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Rom1P32958 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Rom1P32958 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rom1P32958 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rom1P32958 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rom1P32958 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rom1P32958 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC11.88□□□□□ -0.51
Rom1P32958 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rom1P32958 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rom1P32958 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rom1P32958 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rom1P32958 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rom1P32958 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rom1P32958 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Rom1P32958 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rom1P32958 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rom1P32958 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rom1P32958 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Rom1P32958 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rom1P32958 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Rom1P32958 Gm11860-201ENSMUST00000122346 1010 ntBASIC11.88□□□□□ -0.51
Rom1P32958 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC11.88□□□□□ -0.51
Rom1P32958 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rom1P32958 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rom1P32958 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC11.88□□□□□ -0.51
Rom1P32958 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rom1P32958 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rom1P32958 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rom1P32958 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rom1P32958 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC11.88□□□□□ -0.51
Rom1P32958 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rom1P32958 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rom1P32958 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rom1P32958 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rom1P32958 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rom1P32958 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rom1P32958 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rom1P32958 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rom1P32958 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rom1P32958 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rom1P32958 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rom1P32958 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rom1P32958 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rom1P32958 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rom1P32958 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Rom1P32958 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Rom1P32958 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rom1P32958 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Rom1P32958 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rom1P32958 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rom1P32958 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rom1P32958 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rom1P32958 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Rom1P32958 Gm43195-201ENSMUST00000200614 2332 ntBASIC11.87□□□□□ -0.51
Rom1P32958 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Rom1P32958 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rom1P32958 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rom1P32958 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Rom1P32958 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rom1P32958 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
Rom1P32958 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rom1P32958 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC11.87□□□□□ -0.51
Rom1P32958 Gm8344-201ENSMUST00000119813 856 ntBASIC11.87□□□□□ -0.51
Rom1P32958 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Rom1P32958 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC11.87□□□□□ -0.51
Rom1P32958 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rom1P32958 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC11.87□□□□□ -0.51
Rom1P32958 AC158538.2-201ENSMUST00000225455 906 ntBASIC11.87□□□□□ -0.51
Rom1P32958 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rom1P32958 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Rom1P32958 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rom1P32958 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rom1P32958 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC11.87□□□□□ -0.51
Rom1P32958 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms