Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC14.26□□□□□ -0.13
Slc6a11P31650 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
Slc6a11P31650 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC14.26□□□□□ -0.13
Slc6a11P31650 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.26□□□□□ -0.13
Slc6a11P31650 Gm12134-201ENSMUST00000122109 520 ntBASIC14.26□□□□□ -0.13
Slc6a11P31650 Gm12260-201ENSMUST00000122447 411 ntBASIC14.26□□□□□ -0.13
Slc6a11P31650 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Slc6a11P31650 Gm19164-201ENSMUST00000210667 640 ntBASIC14.26□□□□□ -0.13
Slc6a11P31650 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC14.26□□□□□ -0.13
Slc6a11P31650 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Slc6a11P31650 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Slc6a11P31650 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Slc6a11P31650 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Slc6a11P31650 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Slc6a11P31650 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Slc6a11P31650 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Slc6a11P31650 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Slc6a11P31650 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Slc6a11P31650 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Slc6a11P31650 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Slc6a11P31650 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Slc6a11P31650 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Slc6a11P31650 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Slc6a11P31650 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Slc6a11P31650 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Slc6a11P31650 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Slc6a11P31650 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Slc6a11P31650 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Slc6a11P31650 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Slc6a11P31650 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Slc6a11P31650 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.25□□□□□ -0.13
Slc6a11P31650 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Slc6a11P31650 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
Slc6a11P31650 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Slc6a11P31650 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Slc6a11P31650 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Slc6a11P31650 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Slc6a11P31650 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Slc6a11P31650 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Slc6a11P31650 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Slc6a11P31650 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC14.25□□□□□ -0.13
Slc6a11P31650 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Slc6a11P31650 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Slc6a11P31650 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.25□□□□□ -0.13
Slc6a11P31650 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Slc6a11P31650 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC14.25□□□□□ -0.13
Slc6a11P31650 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC14.25□□□□□ -0.13
Slc6a11P31650 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Slc6a11P31650 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Slc6a11P31650 Rbfox2-207ENSMUST00000227533 1041 ntBASIC14.25□□□□□ -0.13
Slc6a11P31650 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Slc6a11P31650 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Slc6a11P31650 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Slc6a11P31650 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Slc6a11P31650 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Slc6a11P31650 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Slc6a11P31650 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Slc6a11P31650 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Slc6a11P31650 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Slc6a11P31650 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.25□□□□□ -0.13
Slc6a11P31650 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.25□□□□□ -0.13
Slc6a11P31650 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Slc6a11P31650 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Slc6a11P31650 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Slc6a11P31650 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Slc6a11P31650 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Slc6a11P31650 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Slc6a11P31650 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.25□□□□□ -0.13
Slc6a11P31650 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
Slc6a11P31650 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Slc6a11P31650 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Slc6a11P31650 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Slc6a11P31650 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Slc6a11P31650 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Slc6a11P31650 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Slc6a11P31650 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Slc6a11P31650 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Slc6a11P31650 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Slc6a11P31650 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Slc6a11P31650 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC14.24□□□□□ -0.13
Slc6a11P31650 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Slc6a11P31650 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Slc6a11P31650 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Slc6a11P31650 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC14.24□□□□□ -0.13
Slc6a11P31650 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC14.24□□□□□ -0.13
Slc6a11P31650 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Slc6a11P31650 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Slc6a11P31650 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Slc6a11P31650 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Slc6a11P31650 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.24□□□□□ -0.13
Slc6a11P31650 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Slc6a11P31650 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Slc6a11P31650 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Slc6a11P31650 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Slc6a11P31650 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Slc6a11P31650 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Slc6a11P31650 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Slc6a11P31650 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.24□□□□□ -0.13
Slc6a11P31650 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Slc6a11P31650 Gm38318-201ENSMUST00000195769 1706 ntBASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms