Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC12.95□□□□□ -0.34
Slc6a1P31648 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Slc6a1P31648 Gm11950-201ENSMUST00000121615 838 ntBASIC12.95□□□□□ -0.34
Slc6a1P31648 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC12.95□□□□□ -0.34
Slc6a1P31648 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC12.95□□□□□ -0.34
Slc6a1P31648 Ighv6-1-201ENSMUST00000193612 343 ntBASIC12.95□□□□□ -0.34
Slc6a1P31648 Gm29707-201ENSMUST00000196325 491 ntBASIC12.95□□□□□ -0.34
Slc6a1P31648 Gm45328-201ENSMUST00000210942 917 ntBASIC12.95□□□□□ -0.34
Slc6a1P31648 AC130713.1-201ENSMUST00000228853 1096 ntBASIC12.95□□□□□ -0.34
Slc6a1P31648 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Slc6a1P31648 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Slc6a1P31648 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Slc6a1P31648 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Slc6a1P31648 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Slc6a1P31648 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Slc6a1P31648 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Slc6a1P31648 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Slc6a1P31648 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Slc6a1P31648 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC12.95□□□□□ -0.34
Slc6a1P31648 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Slc6a1P31648 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Slc6a1P31648 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Slc6a1P31648 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Slc6a1P31648 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Slc6a1P31648 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Slc6a1P31648 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Slc6a1P31648 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Slc6a1P31648 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Slc6a1P31648 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Slc6a1P31648 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Slc6a1P31648 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Slc6a1P31648 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Slc6a1P31648 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Slc6a1P31648 Gm28182-201ENSMUST00000188354 2477 ntBASIC12.95□□□□□ -0.34
Slc6a1P31648 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC12.95□□□□□ -0.34
Slc6a1P31648 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Slc6a1P31648 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Slc6a1P31648 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Slc6a1P31648 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Slc6a1P31648 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Slc6a1P31648 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Slc6a1P31648 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Slc6a1P31648 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Slc6a1P31648 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Slc6a1P31648 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Slc6a1P31648 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Slc6a1P31648 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Slc6a1P31648 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Slc6a1P31648 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Slc6a1P31648 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Slc6a1P31648 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Slc6a1P31648 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Slc6a1P31648 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC12.94□□□□□ -0.34
Slc6a1P31648 Gm7284-201ENSMUST00000131667 944 ntBASIC12.94□□□□□ -0.34
Slc6a1P31648 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC12.94□□□□□ -0.34
Slc6a1P31648 Gm27704-201ENSMUST00000185094 107 ntBASIC12.94□□□□□ -0.34
Slc6a1P31648 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Slc6a1P31648 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Slc6a1P31648 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Slc6a1P31648 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC12.94□□□□□ -0.34
Slc6a1P31648 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Slc6a1P31648 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Slc6a1P31648 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Slc6a1P31648 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Slc6a1P31648 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Slc6a1P31648 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Slc6a1P31648 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Slc6a1P31648 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Slc6a1P31648 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Slc6a1P31648 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Slc6a1P31648 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Slc6a1P31648 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
Slc6a1P31648 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Slc6a1P31648 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Slc6a1P31648 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Slc6a1P31648 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Slc6a1P31648 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Slc6a1P31648 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Slc6a1P31648 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC12.93□□□□□ -0.34
Slc6a1P31648 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Slc6a1P31648 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC12.93□□□□□ -0.34
Slc6a1P31648 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Slc6a1P31648 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
Slc6a1P31648 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Slc6a1P31648 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC12.93□□□□□ -0.34
Slc6a1P31648 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC12.93□□□□□ -0.34
Slc6a1P31648 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Slc6a1P31648 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC12.93□□□□□ -0.34
Slc6a1P31648 Gm37722-201ENSMUST00000193757 208 ntBASIC12.93□□□□□ -0.34
Slc6a1P31648 Gm17808-201ENSMUST00000200859 894 ntBASIC12.93□□□□□ -0.34
Slc6a1P31648 Gm10459-201ENSMUST00000202708 1155 ntBASIC12.93□□□□□ -0.34
Slc6a1P31648 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Slc6a1P31648 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Slc6a1P31648 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Slc6a1P31648 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Slc6a1P31648 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Slc6a1P31648 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Slc6a1P31648 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Slc6a1P31648 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Slc6a1P31648 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms