Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cd40lgP27548 Gm5253-201ENSMUST00000187104 1025 ntBASIC13.86□□□□□ -0.19
Cd40lgP27548 Gm43935-201ENSMUST00000203569 1050 ntBASIC13.86□□□□□ -0.19
Cd40lgP27548 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cd40lgP27548 Gm5364-201ENSMUST00000216789 889 ntBASIC13.86□□□□□ -0.19
Cd40lgP27548 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC13.86□□□□□ -0.19
Cd40lgP27548 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cd40lgP27548 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cd40lgP27548 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC13.86□□□□□ -0.19
Cd40lgP27548 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cd40lgP27548 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Cd40lgP27548 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cd40lgP27548 Grk6-207ENSMUST00000225925 2769 ntBASIC13.86□□□□□ -0.19
Cd40lgP27548 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cd40lgP27548 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cd40lgP27548 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC13.86□□□□□ -0.19
Cd40lgP27548 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cd40lgP27548 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Cd40lgP27548 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cd40lgP27548 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cd40lgP27548 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cd40lgP27548 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cd40lgP27548 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC13.85□□□□□ -0.19
Cd40lgP27548 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cd40lgP27548 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cd40lgP27548 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Cd40lgP27548 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cd40lgP27548 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
Cd40lgP27548 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Cd40lgP27548 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cd40lgP27548 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cd40lgP27548 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cd40lgP27548 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cd40lgP27548 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cd40lgP27548 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC13.85□□□□□ -0.19
Cd40lgP27548 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cd40lgP27548 Gm14722-201ENSMUST00000118943 689 ntBASIC13.85□□□□□ -0.19
Cd40lgP27548 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cd40lgP27548 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC13.85□□□□□ -0.19
Cd40lgP27548 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cd40lgP27548 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC13.85□□□□□ -0.19
Cd40lgP27548 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Cd40lgP27548 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC13.85□□□□□ -0.19
Cd40lgP27548 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cd40lgP27548 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cd40lgP27548 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cd40lgP27548 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cd40lgP27548 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cd40lgP27548 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cd40lgP27548 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
Cd40lgP27548 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cd40lgP27548 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cd40lgP27548 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cd40lgP27548 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Cd40lgP27548 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cd40lgP27548 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cd40lgP27548 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cd40lgP27548 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cd40lgP27548 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cd40lgP27548 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cd40lgP27548 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cd40lgP27548 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.84□□□□□ -0.19
Cd40lgP27548 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cd40lgP27548 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cd40lgP27548 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cd40lgP27548 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cd40lgP27548 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.84□□□□□ -0.19
Cd40lgP27548 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cd40lgP27548 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cd40lgP27548 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cd40lgP27548 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC13.84□□□□□ -0.19
Cd40lgP27548 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Cd40lgP27548 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Cd40lgP27548 Gm27628-201ENSMUST00000184911 107 ntBASIC13.84□□□□□ -0.19
Cd40lgP27548 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC13.84□□□□□ -0.19
Cd40lgP27548 Gm42670-201ENSMUST00000201816 1292 ntBASIC13.84□□□□□ -0.19
Cd40lgP27548 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC13.84□□□□□ -0.19
Cd40lgP27548 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC13.84□□□□□ -0.19
Cd40lgP27548 Psmb5-202ENSMUST00000227257 622 ntBASIC13.84□□□□□ -0.19
Cd40lgP27548 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cd40lgP27548 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cd40lgP27548 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cd40lgP27548 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Cd40lgP27548 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.84□□□□□ -0.19
Cd40lgP27548 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Cd40lgP27548 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cd40lgP27548 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cd40lgP27548 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Cd40lgP27548 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cd40lgP27548 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cd40lgP27548 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Cd40lgP27548 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cd40lgP27548 Gm44616-201ENSMUST00000206417 1732 ntBASIC13.84□□□□□ -0.19
Cd40lgP27548 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cd40lgP27548 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cd40lgP27548 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cd40lgP27548 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cd40lgP27548 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Cd40lgP27548 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cd40lgP27548 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 75.1 ms