Protein–RNA interactions for Protein: P23611

Irf8, Interferon regulatory factor 8, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf8P23611 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Irf8P23611 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Irf8P23611 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC16.17■□□□□ 0.18
Irf8P23611 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC16.17■□□□□ 0.18
Irf8P23611 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Irf8P23611 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Irf8P23611 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Irf8P23611 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Irf8P23611 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Irf8P23611 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Irf8P23611 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Irf8P23611 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Irf8P23611 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Irf8P23611 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Irf8P23611 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Irf8P23611 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Irf8P23611 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Irf8P23611 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Irf8P23611 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Irf8P23611 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Irf8P23611 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Irf8P23611 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Irf8P23611 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Irf8P23611 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Irf8P23611 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Irf8P23611 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Irf8P23611 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Irf8P23611 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Irf8P23611 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
Irf8P23611 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Irf8P23611 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Irf8P23611 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC16.16■□□□□ 0.18
Irf8P23611 Trav13-3-201ENSMUST00000117226 336 ntBASIC16.16■□□□□ 0.18
Irf8P23611 Gm15427-201ENSMUST00000117288 531 ntBASIC16.16■□□□□ 0.18
Irf8P23611 Gm12892-201ENSMUST00000117367 1146 ntBASIC16.16■□□□□ 0.18
Irf8P23611 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC16.16■□□□□ 0.18
Irf8P23611 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Irf8P23611 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC16.16■□□□□ 0.18
Irf8P23611 Gm8597-201ENSMUST00000191525 1109 ntBASIC16.16■□□□□ 0.18
Irf8P23611 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Irf8P23611 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Irf8P23611 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Irf8P23611 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Irf8P23611 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Irf8P23611 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Irf8P23611 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Irf8P23611 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Irf8P23611 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC16.16■□□□□ 0.18
Irf8P23611 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Irf8P23611 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Irf8P23611 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Irf8P23611 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Irf8P23611 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Irf8P23611 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Irf8P23611 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Irf8P23611 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Irf8P23611 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Irf8P23611 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Irf8P23611 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Irf8P23611 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC16.15■□□□□ 0.18
Irf8P23611 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Irf8P23611 Gm43332-201ENSMUST00000202511 1044 ntBASIC16.15■□□□□ 0.18
Irf8P23611 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Irf8P23611 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC16.15■□□□□ 0.18
Irf8P23611 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC16.15■□□□□ 0.18
Irf8P23611 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC16.15■□□□□ 0.18
Irf8P23611 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Irf8P23611 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Irf8P23611 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Irf8P23611 Camk2g-217ENSMUST00000226630 1937 ntBASIC16.15■□□□□ 0.18
Irf8P23611 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Irf8P23611 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC16.15■□□□□ 0.18
Irf8P23611 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
Irf8P23611 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Irf8P23611 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Irf8P23611 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Irf8P23611 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Irf8P23611 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Irf8P23611 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Irf8P23611 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Irf8P23611 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Irf8P23611 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Irf8P23611 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Irf8P23611 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Irf8P23611 Gm14026-201ENSMUST00000120625 1789 ntBASIC16.14■□□□□ 0.17
Irf8P23611 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
Irf8P23611 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Irf8P23611 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Irf8P23611 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Irf8P23611 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Irf8P23611 Gm9385-201ENSMUST00000117563 472 ntBASIC16.14■□□□□ 0.17
Irf8P23611 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC16.14■□□□□ 0.17
Irf8P23611 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Irf8P23611 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Irf8P23611 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Irf8P23611 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC16.14■□□□□ 0.17
Irf8P23611 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC16.14■□□□□ 0.17
Irf8P23611 Bloc1s5-203ENSMUST00000224902 612 ntBASIC16.14■□□□□ 0.17
Irf8P23611 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Irf8P23611 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms