Protein–RNA interactions for Protein: P20615

Hoxb9, Homeobox protein Hox-B9, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb9P20615 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC14.37□□□□□ -0.11
Hoxb9P20615 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxb9P20615 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC14.37□□□□□ -0.11
Hoxb9P20615 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC14.37□□□□□ -0.11
Hoxb9P20615 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC14.37□□□□□ -0.11
Hoxb9P20615 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxb9P20615 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxb9P20615 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxb9P20615 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Hoxb9P20615 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxb9P20615 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Hoxb9P20615 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
Hoxb9P20615 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxb9P20615 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxb9P20615 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxb9P20615 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.37□□□□□ -0.11
Hoxb9P20615 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxb9P20615 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Hoxb9P20615 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Hoxb9P20615 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxb9P20615 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxb9P20615 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.37□□□□□ -0.11
Hoxb9P20615 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxb9P20615 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxb9P20615 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hoxb9P20615 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxb9P20615 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxb9P20615 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxb9P20615 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxb9P20615 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Hoxb9P20615 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxb9P20615 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxb9P20615 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxb9P20615 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxb9P20615 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxb9P20615 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxb9P20615 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxb9P20615 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxb9P20615 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC14.36□□□□□ -0.11
Hoxb9P20615 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC14.36□□□□□ -0.11
Hoxb9P20615 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.36□□□□□ -0.11
Hoxb9P20615 Psmb5-202ENSMUST00000227257 622 ntBASIC14.36□□□□□ -0.11
Hoxb9P20615 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxb9P20615 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxb9P20615 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.36□□□□□ -0.11
Hoxb9P20615 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Hoxb9P20615 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxb9P20615 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxb9P20615 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxb9P20615 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxb9P20615 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.36□□□□□ -0.11
Hoxb9P20615 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxb9P20615 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Hoxb9P20615 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Hoxb9P20615 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxb9P20615 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Hoxb9P20615 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Hoxb9P20615 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxb9P20615 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxb9P20615 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxb9P20615 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxb9P20615 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Hoxb9P20615 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxb9P20615 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC14.35□□□□□ -0.11
Hoxb9P20615 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxb9P20615 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxb9P20615 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14.35□□□□□ -0.11
Hoxb9P20615 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC14.35□□□□□ -0.11
Hoxb9P20615 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxb9P20615 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxb9P20615 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC14.35□□□□□ -0.11
Hoxb9P20615 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxb9P20615 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxb9P20615 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxb9P20615 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxb9P20615 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Hoxb9P20615 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Hoxb9P20615 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxb9P20615 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxb9P20615 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxb9P20615 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxb9P20615 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxb9P20615 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxb9P20615 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxb9P20615 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxb9P20615 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxb9P20615 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxb9P20615 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxb9P20615 Carlr-201ENSMUST00000181515 2574 ntBASIC14.34□□□□□ -0.11
Hoxb9P20615 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxb9P20615 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.34□□□□□ -0.11
Hoxb9P20615 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxb9P20615 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Hoxb9P20615 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxb9P20615 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxb9P20615 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC14.34□□□□□ -0.11
Hoxb9P20615 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Hoxb9P20615 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.34□□□□□ -0.11
Hoxb9P20615 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC14.34□□□□□ -0.11
Hoxb9P20615 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms